RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 F5P12259 2224 aa27.76■■■□□ 2.04
U2AF1-206ENST00000464750 CDC25CP30307 473 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 CYP4F8P98187 520 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 KNOP1Q1ED39 458 aaKnown RBP27.76■■■□□ 2.03
U2AF1-206ENST00000464750 SOWAHAQ2M3V2 549 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 C12orf56Q8IXR9 622 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 CCDC127Q96BQ5 260 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 CGNQ9P2M7 1197 aaKnown RBP27.76■■■□□ 2.03
U2AF1-206ENST00000464750 HPSEQ9Y251 543 aa27.76■■■□□ 2.03
U2AF1-206ENST00000464750 FAM170BA6NMN3 283 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 GABRDO14764 452 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 ZNF263O14978 683 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 HCRTO43612 131 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 PRPF40AO75400 957 aaKnown RBP27.75■■■□□ 2.03
U2AF1-206ENST00000464750 TNNI1P19237 187 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 TARSP26639 723 aaKnown RBP27.75■■■□□ 2.03
U2AF1-206ENST00000464750 PCSK1P29120 753 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 LHX1P48742 406 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 GPR15P49685 360 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 CCDC142Q17RM4 750 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 TRAPPC11Q7Z392 1133 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 ARID3BQ8IVW6 561 aaPredicted RBP27.75■■■□□ 2.03
U2AF1-206ENST00000464750 KIAA0895Q8NCT3 520 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 PKMYT1Q99640 499 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 BCO2Q9BYV7 579 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 USP25Q9UHP3 1055 aa27.75■■■□□ 2.03
U2AF1-206ENST00000464750 ZNF638Q14966 1978 aaKnown RBP27.75■■■□□ 2.03
U2AF1-206ENST00000464750 KMT5BQ4FZB7 885 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 ZNF852Q6ZMS4 543 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 DPH6Q7L8W6 267 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 GPIHBP1Q8IV16 184 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 C1orf210Q8IVY1 113 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 YAF2Q8IY57 180 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 ABCB6Q9NP58 842 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 TRPV5Q9NQA5 729 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 GTF3C4Q9UKN8 822 aa27.74■■■□□ 2.03
U2AF1-206ENST00000464750 VPS13AQ96RL7 3174 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 STK4Q13043 487 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 LIMS2Q7Z4I7 341 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 STKLD1Q8NE28 680 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 GOLGA5Q8TBA6 731 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 KBTBD7Q8WVZ9 684 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 TASP1Q9H6P5 420 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 MRPS17Q9Y2R5 130 aaKnown RBP27.73■■■□□ 2.03
U2AF1-206ENST00000464750 PTPRDP23468 1912 aa27.73■■■□□ 2.03
U2AF1-206ENST00000464750 FANCMQ8IYD8 2048 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 PRR23AA6NEV1 266 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 SHISA7A6NL88 538 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 DPYSL4O14531 572 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 EXOC3O60645 756 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 SDHAF4Q5VUM1 108 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 ASCL5Q7RTU5 278 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 NELL2Q99435 816 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 SYT15Q9BQS2 421 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 GZF1Q9H116 711 aaPredicted RBP27.72■■■□□ 2.03
U2AF1-206ENST00000464750 ATP6V1DQ9Y5K8 247 aa27.72■■■□□ 2.03
U2AF1-206ENST00000464750 KIF26AQ9ULI4 1882 aaPredicted RBP27.72■■■□□ 2.03
U2AF1-206ENST00000464750 ARNTLO00327 626 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 MAN2B1O00754 1011 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 PRAMEF12O95522 483 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 DMDP11532 3685 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 HMGA1P17096 107 aaKnown RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 CYP2F1P24903 491 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 MAGEA9P43362 315 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 SYKP43405 635 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 RPL10AP62906 217 aaKnown RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 FCHO2Q0JRZ9 810 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 PSMD2Q13200 908 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 SPATA2LQ8IUW3 424 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 NKD2Q969F2 451 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 MMS19Q96T76 1030 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 SPATA6Q9NWH7 488 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 MAGED2Q9UNF1 606 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-206ENST00000464750 PIAS3Q9Y6X2 628 aa27.71■■■□□ 2.03
U2AF1-206ENST00000464750 MYBPHLA2RUH7 354 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CHADO15335 359 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CST3P01034 146 aaPredicted RBP27.7■■■□□ 2.02
U2AF1-206ENST00000464750 MYL1P05976 194 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CSH1P0DML2 217 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CSH2P0DML3 217 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 WARSP23381 471 aaKnown RBP27.7■■■□□ 2.02
U2AF1-206ENST00000464750 NDUFA8P51970 172 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 NLRP12P59046 1061 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 PSMC1P62191 440 aaKnown RBP27.7■■■□□ 2.02
U2AF1-206ENST00000464750 DDR2Q16832 855 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CFAP221Q4G0U5 840 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 TMEM150AQ86TG1 271 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 SCAND2PQ9GZW5 306 aaPredicted RBP27.7■■■□□ 2.02
U2AF1-206ENST00000464750 OBP2AQ9NY56 170 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 CDH9Q9ULB4 789 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 NDRG2Q9UN36 371 aaKnown RBP27.7■■■□□ 2.02
U2AF1-206ENST00000464750 GREB1Q4ZG55 1949 aa27.7■■■□□ 2.02
U2AF1-206ENST00000464750 FAM237AA0A1B0GTK4 181 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 NCAM2O15394 837 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 WEE1P30291 646 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 FAM171BQ6P995 826 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 CSGALNACT1Q8TDX6 532 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 ZNF516Q92618 1163 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 CLDN23Q96B33 292 aa27.69■■■□□ 2.02
U2AF1-206ENST00000464750 FUBP3Q96I24 572 aaKnown RBP eCLIP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms