RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GAS2L3Q86XJ1 694 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 SYTL1Q8IYJ3 562 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 TXLNBQ8N3L3 684 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 POC1BQ8TC44 478 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 POF1BQ8WVV4 589 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 DVL3Q92997 716 aaPredicted RBP4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 CHST8Q9H2A9 424 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 MRPS18AQ9NVS2 196 aaKnown RBP4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 CTTNBP2NLQ9P2B4 639 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 MAGED2Q9UNF1 606 aaPredicted RBP4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 PCDHGB2Q9Y5G2 931 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 NCANO14594 1321 aa4.43□□□□□ -1.7
HMGXB4-205ENST00000464480 LOC102723971A0A1B0GUV8 181 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 A0A1W2PS29 197 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 AHRRA9YTQ3 701 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 FAM20BO75063 409 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 TCEA3O75764 348 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 SUN1O94901 812 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 ELANEP08246 267 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 PXNP49023 591 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 TOB1P50616 345 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 LILRA4P59901 499 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 RPS7P62081 194 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 CXADRP78310 365 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 GRM1Q13255 1194 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 STARD3Q14849 445 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 R3HDM1Q15032 1099 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 SLC35G1Q2M3R5 365 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 FAM83BQ5T0W9 1011 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 SKAP1Q86WV1 359 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 C1orf210Q8IVY1 113 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 PALM2Q8IXS6 379 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 TMEM132CQ8N3T6 1108 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 CCDC150Q8NCX0 1101 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 SNX19Q92543 992 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 ZNF566Q969W8 418 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 RNF31Q96EP0 1072 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 CRB3Q9BUF7 120 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 TEX101Q9BY14 249 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 WDR12Q9GZL7 423 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 TBC1D23Q9NUY8 699 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 MID2Q9UJV3 735 aa4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGXB4-205ENST00000464480 LOC102724159A0A0B4J2E5 919 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 MYADML2A6NDP7 307 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 MARCH11A6NNE9 402 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 RAB27BO00194 218 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 AREL1O15033 823 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ADAMTS3O15072 1205 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 DCLK1O15075 740 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 TRIAP1O43715 76 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 NCR1O76036 304 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 FOSP01100 380 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 IDEP14735 1019 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 EEF1GP26641 437 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 NPTX2P47972 431 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 TRAPPC10P48553 1259 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 HSPA7P48741 367 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 NDUFV1P49821 464 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 CPT1AP50416 773 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 MC2RQ01718 297 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ICA1Q05084 483 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 FPGSQ05932 587 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 DYRK1AQ13627 763 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 BOP1Q14137 746 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ARHGEF7Q14155 803 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 HLXQ14774 488 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 PWP2Q15269 919 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 CYP2A13Q16696 494 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 MPEG1Q2M385 716 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 B3GNTL1Q67FW5 361 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 SFRP4Q6FHJ7 346 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 COLGALT2Q8IYK4 626 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ZNF483Q8TF39 744 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 TMEM125Q96AQ2 219 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 LRRC46Q96FV0 321 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 TMEM41AQ96HV5 264 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 BOD1Q96IK1 185 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ALOXE3Q9BYJ1 711 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 MAGEB5Q9BZ81 275 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 DHX36Q9H2U1 1008 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 ZNF703Q9H7S9 590 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 PTPRHQ9HD43 1115 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 HEYLQ9NQ87 328 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 XPNPEP3Q9NQH7 507 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 VSX1Q9NZR4 365 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 SPATA31A3Q5VYP0 1347 aa4.41□□□□□ -1.7
HMGXB4-205ENST00000464480 TRGV11A0A075B6L2 103 aa4.4□□□□□ -1.71
HMGXB4-205ENST00000464480 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
HMGXB4-205ENST00000464480 HNRNPDLO14979 420 aaKnown RBP4.4□□□□□ -1.71
HMGXB4-205ENST00000464480 CDKL5O76039 1030 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms