RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 CXorf38Q8TB03 319 aa21.5■■□□□ 1.03
TUBGCP3-204ENST00000464139 LHX5Q9H2C1 402 aa21.5■■□□□ 1.03
TUBGCP3-204ENST00000464139 INTS9Q9NV88 658 aaKnown RBP21.5■■□□□ 1.03
TUBGCP3-204ENST00000464139 STRIP2Q9ULQ0 834 aa21.5■■□□□ 1.03
TUBGCP3-204ENST00000464139 MED7O43513 233 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 GH1P01241 217 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 MCF2P10911 925 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 CREB1P16220 341 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 DRD4P21917 467 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 POLR2BP30876 1174 aaKnown RBP21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 CDKN2BP42772 138 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 MKRN3Q13064 507 aaKnown RBP21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SLC10A6Q3KNW5 377 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 ZNF792Q3KQV3 632 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 HIBCHQ6NVY1 386 aaPredicted RBP21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 DPH6Q7L8W6 267 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 KIAA0319LQ8IZA0 1049 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 NIPA2Q8N8Q9 360 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 BBOF1Q8ND07 529 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 CHMP6Q96FZ7 201 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SEC16BQ96JE7 1060 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SYNCQ9H7C4 482 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SIGLEC16A6NMB1 481 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 LINC01465Q8N7H1 131 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 PPM1EQ8WY54 764 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SLC10A4Q96EP9 437 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SERPINB12Q96P63 405 aa21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 PRMT1Q99873 361 aaKnown RBP21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 SAE1Q9UBE0 346 aaPredicted RBP21.49■■□□□ 1.03
TUBGCP3-204ENST00000464139 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 ERBB2P04626 1255 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 IL1R2P27930 398 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 ARSEP51690 589 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 DYNLT1P63172 113 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 PLCB3Q01970 1234 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 LMNB2Q03252 620 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 PTPN11Q06124 597 aaPredicted RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 FAM187BQ17R55 369 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 C6orf89Q6UWU4 347 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 ARHGEF2Q92974 986 aaKnown RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 METTL5Q9NRN9 209 aaKnown RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 DDX56Q9NY93 547 aaKnown RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 C5orf60A6NFR6 353 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 LRCH4O75427 683 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 IFNAR2P48551 515 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 COPS2P61201 443 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 TNFAIP2Q03169 654 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 TAOK1Q7L7X3 1001 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 XYLT1Q86Y38 959 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 ALLCQ8N6M5 410 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 NLRP7Q8WX94 980 aa21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 RBM15Q96T37 977 aaKnown RBP eCLIP21.48■■□□□ 1.03
TUBGCP3-204ENST00000464139 MAGEB2O15479 319 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 CILPO75339 1184 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 SLC25A11Q02978 314 aaKnown RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 SF3A3Q12874 501 aaKnown RBP eCLIP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 GPS1Q13098 491 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 LDLRAD1Q5T700 205 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 TMEM176AQ96HP8 235 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 ZNF317Q96PQ6 595 aaPredicted RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 C16orf70Q9BSU1 422 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 TMEM121Q9BTD3 319 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 ZNF408Q9H9D4 720 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 AGAP1Q9UPQ3 857 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 ATXN2Q99700 1313 aaKnown RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 PLXNA1Q9UIW2 1896 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 LOC102724159A0A0B4J2E5 919 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 C3orf70A6NLC5 250 aaPredicted RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 MICAL2O94851 1124 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 CETPP11597 493 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 POU5F1BQ06416 359 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 PWP2Q15269 919 aaKnown RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 CYP4F22Q6NT55 531 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 DRICH1Q6PGQ1 229 aaPredicted RBP21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 PPTC7Q8NI37 304 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 HPDLQ96IR7 371 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 C10orf88Q9H8K7 445 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 TBK1Q9UHD2 729 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 PNMA3Q9UL41 463 aa21.47■■□□□ 1.03
TUBGCP3-204ENST00000464139 M0QYV0 167 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 DNALI1O14645 258 aaPredicted RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 VCPP55072 806 aaKnown RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 OASLQ15646 514 aaKnown RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 CNGA2Q16280 664 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 HP1BP3Q5SSJ5 553 aaPredicted RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 MTHFD1LQ6UB35 978 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 CYP4X1Q8N118 509 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 ZCCHC9Q8N567 271 aaKnown RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 UBA3Q8TBC4 463 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 MGARPQ8TDB4 240 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 CABS1Q96KC9 395 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 HEXIM2Q96MH2 286 aaKnown RBP21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 PCSK1NQ9UHG2 260 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 PDHXO00330 501 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 IFNB1P01574 187 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 PTPN7P35236 360 aa21.46■■□□□ 1.03
TUBGCP3-204ENST00000464139 MAGEA4P43358 317 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms