RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 WSCD1Q658N2 575 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 ADALQ6DHV7 355 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 GIPC2Q8TF65 315 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-210ENST00000464078 EBF3Q9H4W6 596 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 ABI2Q9NYB9 513 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-210ENST00000464078 SLC8A2Q9UPR5 921 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 PCDHB5Q9Y5E4 795 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 MYO16Q9Y6X6 1858 aa18.65■□□□□ 0.58
HMGN1-210ENST00000464078 ATG2BQ96BY7 2078 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 KPNA7A9QM74 516 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 ANKRD63C9JTQ0 380 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 AXIN1O15169 862 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 RNF40O75150 1001 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 CCDC192P0DO97 292 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 PLCG1P19174 1290 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 DRD1P21728 446 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 PXNP49023 591 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-210ENST00000464078 PDGFRLQ15198 375 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 NFE2Q16621 373 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-210ENST00000464078 FBXO43Q4G163 708 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 TRIM68Q6AZZ1 485 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 MON1AQ86VX9 555 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 MAB21L3Q8N8X9 362 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 RIN3Q8TB24 985 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 RAD54LQ92698 747 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 HVCN1Q96D96 273 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 ZNF560Q96MR9 790 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 ABCB6Q9NP58 842 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 RXFP3Q9NSD7 469 aa18.64■□□□□ 0.57
HMGN1-210ENST00000464078 AGO2Q9UKV8 859 aaKnown RBP18.64■□□□□ 0.57
HMGN1-210ENST00000464078 TISP43B9A030 160 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 IL18RAPO95256 599 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 EGFP01133 1207 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
HMGN1-210ENST00000464078 CSH1P0DML2 217 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 CSH2P0DML3 217 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 MPLP40238 635 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 PNPLA4P41247 253 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 TSPY1Q01534 308 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 N4BP2L1Q5TBK1 243 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-210ENST00000464078 STPG1Q5TH74 334 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 CC2D1AQ6P1N0 951 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-210ENST00000464078 EFCAB13Q8IY85 973 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 MRPS31Q92665 395 aaKnown RBP18.63■□□□□ 0.57
HMGN1-210ENST00000464078 EXOC4Q96A65 974 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 TRMT2BQ96GJ1 504 aaKnown RBP18.63■□□□□ 0.57
HMGN1-210ENST00000464078 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 VPS45Q9NRW7 570 aa18.63■□□□□ 0.57
HMGN1-210ENST00000464078 TADA3O75528 432 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 PPP1R37O75864 691 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 BMP15O95972 392 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 ARSAP15289 507 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 LONP1P36776 959 aaKnown RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 CDR1P51861 262 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 DHX8Q14562 1220 aaKnown RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 MCM6Q14566 821 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 KARSQ15046 597 aaKnown RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 CCDC6Q16204 474 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 PLK5Q496M5 336 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 ZC2HC1CQ53FD0 456 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 TXNDC8Q6A555 127 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 CRELD2Q6UXH1 353 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 SYT13Q7L8C5 426 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 CPA6Q8N4T0 437 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 CHAMP1Q96JM3 812 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 P2RY13Q9BPV8 354 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 TMLHEQ9NVH6 421 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 UXTQ9UBK9 157 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-210ENST00000464078 EBF1Q9UH73 591 aa18.62■□□□□ 0.57
HMGN1-210ENST00000464078 HELZP42694 1942 aaKnown RBP18.61■□□□□ 0.57
HMGN1-210ENST00000464078 NOL4O94818 638 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 KCNA4P22459 653 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ADSSP30520 456 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 GJA4P35212 333 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 MTF1Q14872 753 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 SPATA18Q8TC71 538 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ACDQ96AP0 544 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ZHX3Q9H4I2 956 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 TMEM206Q9H813 350 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 FBRSL1Q9HCM7 1045 aaKnown RBP18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ZZEF1O43149 2961 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ZFYVE26Q68DK2 2539 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 ANAPC1Q9H1A4 1944 aa18.61■□□□□ 0.57
HMGN1-210ENST00000464078 H3BQV1 296 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 GALK1P51570 392 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 RPL10AP62906 217 aaKnown RBP18.6■□□□□ 0.57
HMGN1-210ENST00000464078 USP4Q13107 963 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 POSTNQ15063 836 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 ZNF77Q15935 545 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 PDCL2Q8N4E4 241 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 OSCP1Q8WVF1 389 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 EZH1Q92800 747 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms