RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 R3HCC1Q9Y3T6 440 aaKnown RBP15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 NUP210Q8TEM1 1887 aaPredicted RBP15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 FRYLO94915 3013 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 GABRDO14764 452 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 LILRB5O75023 590 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 KRT19P08727 400 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 CSH1P0DML2 217 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 CSH2P0DML3 217 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 CHRNB1P11230 501 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 HMGA1P17096 107 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 CCNE1P24864 410 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 PCSK1P29120 753 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 HOXD13P35453 343 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 NRLP54845 237 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 RPL10AP62906 217 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 ASIC1P78348 528 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 FOXK2Q01167 660 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 DUOXA2Q1HG44 320 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 INTS6LQ5JSJ4 861 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 FAM26FQ5R3K3 315 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 RALGPS2Q86X27 583 aaPredicted RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 CELF5Q8N6W0 485 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 GLIS3Q8NEA6 775 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 BPIFB1Q8TDL5 484 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 GIPC2Q8TF65 315 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 DHX58Q96C10 678 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 THG1LQ9NWX6 298 aaKnown RBP15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 HSPBP1Q9NZL4 362 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 UBE4BO95155 1302 aa15.43■□□□□ 0.06
SNRNP40-203ENST00000463988 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 PRAMEF12O95522 483 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 TNNC2P02585 160 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 F11P03951 625 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 TDGF1P13385 188 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 CCR3P51677 355 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 NLRP12P59046 1061 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 CYP4F8P98187 520 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 EHHADHQ08426 723 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 LRRC32Q14392 662 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 SOWAHAQ2M3V2 549 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 CFAP221Q4G0U5 840 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 TMEM150AQ86TG1 271 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 CBWD2Q8IUF1 395 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 WDR49Q8IV35 697 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 HSCBQ8IWL3 235 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 CMTM8Q8IZV2 173 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 HPS3Q969F9 1004 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 TRMT2BQ96GJ1 504 aaKnown RBP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 FUBP3Q96I24 572 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 PI4K2AQ9BTU6 479 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 UXTQ9UBK9 157 aaPredicted RBP15.42■□□□□ 0.06
SNRNP40-203ENST00000463988 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 SPECC1L-ADORA2AF8WAN1 911 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 NOL4O94818 638 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 F13A1P00488 732 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 CTHP32929 405 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 AVPR1AP37288 418 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 ID4P47928 161 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 CDR1P51861 262 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 SCARA3Q6AZY7 606 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 FAM171BQ6P995 826 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 GPIHBP1Q8IV16 184 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 ADGRF2Q8IZF7 708 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 SPEM1Q8N4L4 309 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 OR5B17Q8NGF7 314 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 FAM84AQ96KN4 292 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 MYRFLQ96LU7 910 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 KIF9Q9HAQ2 790 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 CGNQ9P2M7 1197 aaKnown RBP15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 GTF3C4Q9UKN8 822 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
SNRNP40-203ENST00000463988 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 PAPSS2O95340 614 aaPredicted RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 HSP90AA1P07900 732 aaKnown RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 ACAT1P24752 427 aaKnown RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 CYP2F1P24903 491 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 MAGEA11P43364 429 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 CXCL12P48061 93 aa15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 ZNF268Q14587 947 aaPredicted RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 SNRNP35Q16560 246 aaKnown RBP15.4■□□□□ 0.06
SNRNP40-203ENST00000463988 BMT2Q1RMZ1 405 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms