RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 STK25O00506 426 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 IKBKBO14920 756 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 TACC1O75410 805 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 C4BPAP04003 597 aaKnown RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 KRT13P13646 458 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 GABRR2P28476 465 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 CDC25CP30307 473 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 CLCN5P51795 746 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 DLG4P78352 724 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 PFKPQ01813 784 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ADAM9Q13443 819 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 NCOA4Q13772 614 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 EDRF1Q3B7T1 1238 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 CFAP221Q4G0U5 840 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ZNF658Q5TYW1 1059 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 TANGO2Q6ICL3 276 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 POTEHQ6S545 545 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 C4orf50Q6ZRC1 276 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 INTS8Q75QN2 995 aaKnown RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 FAM186BQ8IYM0 893 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 OR6B3Q8NGW1 331 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ZSCAN18Q8TBC5 510 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 FAM122AQ96E09 287 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 FUBP3Q96I24 572 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 GCNAQ96QF7 691 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 XYLT2Q9H1B5 865 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ATXN3LQ9H3M9 355 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ZNF334Q9HCZ1 680 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 ARHGEF3Q9NR81 526 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 CHMP5Q9NZZ3 219 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 NXF1Q9UBU9 619 aaKnown RBP17.37■□□□□ 0.37
COL1A1-202ENST00000463440 PCDHA5Q9Y5H7 936 aa17.37■□□□□ 0.37
COL1A1-202ENST00000463440 MYBPHLA2RUH7 354 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 KRBA1A5PL33 1030 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-202ENST00000463440 HCRTO43612 131 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 AKAP3O75969 853 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 CSH1P0DML2 217 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 CSH2P0DML3 217 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 FCARP24071 287 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 CYP2F1P24903 491 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 LMO2P25791 158 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 PSMC2P35998 433 aaKnown RBP17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
COL1A1-202ENST00000463440 VAMP7P51809 220 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 NUBP1P53384 320 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ZNF699Q32M78 642 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ZACNQ401N2 412 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ZCWPW2Q504Y3 356 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ZNF667Q5HYK9 610 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 FAM171BQ6P995 826 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 GAREM2Q75VX8 874 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 ELOA2Q8IYF1 753 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-202ENST00000463440 SPATA20Q8TB22 786 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 E2F7Q96AV8 911 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 MRPL45Q9BRJ2 306 aaKnown RBP17.36■□□□□ 0.37
COL1A1-202ENST00000463440 TRPV4Q9HBA0 871 aa17.36■□□□□ 0.37
COL1A1-202ENST00000463440 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 ATP2C2O75185 946 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 P4HA1P13674 534 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 NPR3P17342 541 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 PLA2G5P39877 138 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 PRCPP42785 496 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 MAGEA11P43364 429 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 PSMC1P62191 440 aaKnown RBP17.35■□□□□ 0.37
COL1A1-202ENST00000463440 ENPEPQ07075 957 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 SGSM1Q2NKQ1 1148 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 IER5LQ5T953 404 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 CWF19L1Q69YN2 538 aaKnown RBP17.35■□□□□ 0.37
COL1A1-202ENST00000463440 SV2AQ7L0J3 742 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 TAF4BQ92750 862 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 SHDQ96IW2 340 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 TSG101Q99816 390 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 PLA2G2FQ9BZM2 168 aa17.35■□□□□ 0.37
COL1A1-202ENST00000463440 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-202ENST00000463440 CETN3O15182 167 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 VNN1O95497 513 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 AOC1P19801 751 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 GPR15P49685 360 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 CYP27A1Q02318 531 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 DDR2Q16832 855 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 CCDC142Q17RM4 750 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 GPR158Q5T848 1215 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 PHLDB3Q6NSJ2 640 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 TMEM105Q8N8V8 129 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 MYCBPAPQ8TBZ2 947 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 DEPDC1BQ8WUY9 529 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 ERCC4Q92889 916 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-202ENST00000463440 MYLPFQ96A32 169 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 MKNK1Q9BUB5 465 aa17.34■□□□□ 0.37
COL1A1-202ENST00000463440 TRMT61BQ9BVS5 477 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms