RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 CRISPLD1Q9H336 500 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 EPHX3Q9H6B9 360 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 CYP3A43Q9HB55 503 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 HCFC1R1Q9NWW0 138 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 LIMD1Q9UGP4 676 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 ARMCX3Q9UH62 379 aaPredicted RBP13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 PMM2O15305 246 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 PMS1P54277 932 aaKnown RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 PPP3CAQ08209 521 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 VSTM1Q6UX27 236 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SPATA2LQ8IUW3 424 aaPredicted RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 NPAS3Q8IXF0 933 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TTC39CQ8N584 583 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 MLKLQ8NB16 471 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 FGF13Q92913 245 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 DNAJC25Q9H1X3 360 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SOBPA7XYQ1 873 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 MXI1P50539 228 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SIGLEC14Q08ET2 396 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TDGQ13569 410 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 HTR4Q13639 388 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 UNC93AQ86WB7 457 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 LRRC3Q9BY71 257 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 NXF1Q9UBU9 619 aaKnown RBP13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 SLC27A5Q9Y2P5 690 aa13.96□□□□□ -0.17
R3HDM1-213ENST00000463230 BIN1O00499 593 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 GCLMP48507 274 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 CT47A1Q5JQC4 288 aaPredicted RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TMC8Q8IU68 726 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 OR6B3Q8NGW1 331 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 ITFG1Q8TB96 612 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 MRPL45Q9BRJ2 306 aaKnown RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TMLHEQ9NVH6 421 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 RWDD2AQ9UIY3 292 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 CTNND2Q9UQB3 1225 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 DOCK6Q96HP0 2047 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 PTPRDP23468 1912 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 ATP8B3O60423 1300 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TRIM49BA6NDI0 452 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 PRR33A8MZF0 331 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 CSH1P0DML2 217 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 CSH2P0DML3 217 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 ACAT1P24752 427 aaKnown RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 MARSP56192 900 aaKnown RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 CAMK4Q16566 473 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TRIM67Q6ZTA4 783 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 TTC9BQ8N6N2 239 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 NIF3L1Q9GZT8 377 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 EHD2Q9NZN4 543 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 DACH1Q9UI36 760 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 GTF3C4Q9UKN8 822 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 DUSP12Q9UNI6 340 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
R3HDM1-213ENST00000463230 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 ATF6P18850 670 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 LMO2P25791 158 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 WEE1P30291 646 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 CDC25CP30307 473 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 NOP14P78316 857 aaKnown RBP13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 SLC5A9Q2M3M2 681 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 KLHL10Q6JEL2 608 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 TAS1R2Q8TE23 839 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 E2F7Q96AV8 911 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 GCNAQ96QF7 691 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 TRPV4Q9HBA0 871 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 CRTAC1Q9NQ79 661 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 UXTQ9UBK9 157 aaPredicted RBP13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 XIRP2A4UGR9 3374 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 MYO10Q9HD67 2058 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 A8MXQ7 604 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 P4HA2O15460 535 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 ECI2O75521 394 aa13.94□□□□□ -0.18
R3HDM1-213ENST00000463230 NOL4O94818 638 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms