RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 WDR49Q8IV35 697 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 YAF2Q8IY57 180 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 TTC9BQ8N6N2 239 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 RDH13Q8NBN7 331 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 OR5B17Q8NGF7 314 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 GOLGA5Q8TBA6 731 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 GIPC2Q8TF65 315 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 TMEM174Q8WUU8 243 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 NKD2Q969F2 451 aaPredicted RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 HPDLQ96IR7 371 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 GCNAQ96QF7 691 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 FNBP1Q96RU3 617 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 SEPT5Q99719 369 aaPredicted RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 MTMR12Q9C0I1 747 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 BLZF1Q9H2G9 400 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 C8orf33Q9H7E9 229 aaPredicted RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 SLC39A2Q9NP94 309 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 HEBP1Q9NRV9 189 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 TMLHEQ9NVH6 421 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 DDX43Q9NXZ2 648 aaKnown RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 ABI2Q9NYB9 513 aaPredicted RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 SERTAD1Q9UHV2 236 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 GTF3C4Q9UKN8 822 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 FBXO4Q9UKT5 387 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 L1RE1Q9UN81 338 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 MTF2Q9Y483 593 aaPredicted RBP7.82□□□□□ -1.16
PTPRF-210ENST00000463041 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 TSC2P49815 1807 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 GREB1Q4ZG55 1949 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 TICRRQ7Z2Z1 1910 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 ANAPC1Q9H1A4 1944 aa7.82□□□□□ -1.16
PTPRF-210ENST00000463041 ZNF292O60281 2723 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 NUP210Q8TEM1 1887 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 MYH10P35580 1976 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 PRR23AA6NEV1 266 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 LAMTOR5O43504 91 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 KLRC4O43908 158 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 LRRN2O75325 713 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CST3P01034 146 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 F11P03951 625 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SP9P0CG40 484 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 HMGA1P17096 107 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ATF6P18850 670 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CASP1P29466 404 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 GNL1P36915 607 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CYP2J2P51589 502 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 AP3M2P53677 418 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 KRT85P78386 507 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CYP24A1Q07973 514 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 FCHO2Q0JRZ9 810 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 FZD5Q13467 585 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 MAPRE1Q15691 268 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CFAP221Q4G0U5 840 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ARHGAP29Q52LW3 1261 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 INTS6LQ5JSJ4 861 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SCARA3Q6AZY7 606 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ZC3H14Q6PJT7 736 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ASCL5Q7RTU5 278 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 NELFCDQ8IXH7 590 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ADGRF2Q8IZF7 708 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CSGALNACT1Q8TDX6 532 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 FAM3CQ92520 227 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 PAGE5Q96GU1 130 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 MSANTD3Q96H12 275 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 FUBP3Q96I24 572 aaKnown RBP eCLIP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SPATA32Q96LK8 384 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CEP295NLQ96MC4 621 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 PKMYT1Q99640 499 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 MKNK1Q9BUB5 465 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SLC46A2Q9BY10 475 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SCAND2PQ9GZW5 306 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 SPATA6Q9NWH7 488 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 THG1LQ9NWX6 298 aaKnown RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 MAGEC2Q9UBF1 373 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 UXTQ9UBK9 157 aaPredicted RBP7.81□□□□□ -1.16
PTPRF-210ENST00000463041 CDH9Q9ULB4 789 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 ZDHHC9Q9Y397 364 aa7.81□□□□□ -1.16
PTPRF-210ENST00000463041 GVINP1Q7Z2Y8 2422 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 FAM237AA0A1B0GTK4 181 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 A0A1B0GVL5 298 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 MYBPHLA2RUH7 354 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 SHISA7A6NL88 538 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ARNTLO00327 626 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 PDXKO00764 312 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 EXOC3O60645 756 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 TACC1O75410 805 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 KIF20AO95235 890 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 STAU1O95793 577 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 DLATP10515 647 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 PFKFB1P16118 471 aa7.8□□□□□ -1.16
PTPRF-210ENST00000463041 WARSP23381 471 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 ACAT1P24752 427 aaKnown RBP7.8□□□□□ -1.16
PTPRF-210ENST00000463041 CYP2F1P24903 491 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms