RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 ABCB6Q9NP58 842 aa25.66■■□□□ 1.7
SMKR1-201ENST00000462322 SLC2A4RGQ9NR83 387 aa25.66■■□□□ 1.7
SMKR1-201ENST00000462322 CDH9Q9ULB4 789 aa25.66■■□□□ 1.7
SMKR1-201ENST00000462322 MUC6Q6W4X9 2439 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 MYBPHLA2RUH7 354 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 ATP2C2O75185 946 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 TACC1O75410 805 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 FGF19O95750 216 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 KRT13P13646 458 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 CYP2F1P24903 491 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 PSMC2P35998 433 aaKnown RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 GNL1P36915 607 aaPredicted RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 PRCPP42785 496 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 VAMP7P51809 220 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 VCPP55072 806 aaKnown RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 PSMC1P62191 440 aaKnown RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 GPC5P78333 572 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 CCDC142Q17RM4 750 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 ZNF699Q32M78 642 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 EDRF1Q3B7T1 1238 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 TANGO2Q6ICL3 276 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 INTS8Q75QN2 995 aaKnown RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 SPATA2LQ8IUW3 424 aaPredicted RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 FAM186BQ8IYM0 893 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 FLCNQ8NFG4 579 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 OR6B3Q8NGW1 331 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 SPATA20Q8TB22 786 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 GPR88Q9GZN0 384 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 ZFP14Q9HCL3 533 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 CA14Q9ULX7 337 aa25.65■■□□□ 1.7
SMKR1-201ENST00000462322 ARIH1Q9Y4X5 557 aaPredicted RBP25.65■■□□□ 1.7
SMKR1-201ENST00000462322 IKBKBO14920 756 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 VNN1O95497 513 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 FAM163BP0C2L3 166 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 GABRR2P28476 465 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 AVPR2P30518 371 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 ZACNQ401N2 412 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 FAM171BQ6P995 826 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 GAREM2Q75VX8 874 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 ELOA2Q8IYF1 753 aaPredicted RBP25.64■■□□□ 1.7
SMKR1-201ENST00000462322 SMARCD2Q92925 531 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 ELSPBP1Q96BH3 223 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 ASB16Q96NS5 453 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 GTPBP4Q9BZE4 634 aaKnown RBP25.64■■□□□ 1.7
SMKR1-201ENST00000462322 ATXN3LQ9H3M9 355 aa25.64■■□□□ 1.7
SMKR1-201ENST00000462322 GPR15P49685 360 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 RPL10AP62906 217 aaKnown RBP25.63■■□□□ 1.69
SMKR1-201ENST00000462322 MAPRE1Q15691 268 aaKnown RBP25.63■■□□□ 1.69
SMKR1-201ENST00000462322 ZNF667Q5HYK9 610 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 C4orf50Q6ZRC1 276 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 SV2AQ7L0J3 742 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 ZSCAN18Q8TBC5 510 aaPredicted RBP25.63■■□□□ 1.69
SMKR1-201ENST00000462322 FUBP3Q96I24 572 aaKnown RBP eCLIP25.63■■□□□ 1.69
SMKR1-201ENST00000462322 PLA2G2FQ9BZM2 168 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 VRTNQ9H8Y1 702 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 CRTAC1Q9NQ79 661 aa25.63■■□□□ 1.69
SMKR1-201ENST00000462322 KRBA1A5PL33 1030 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 STK25O00506 426 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 TRIM49P0CI25 452 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 TRIM49CP0CI26 452 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 RFX1P22670 979 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 FCARP24071 287 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 DDR2Q16832 855 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 SGSM1Q2NKQ1 1148 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 CFAP221Q4G0U5 840 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 ARHGAP15Q53QZ3 475 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 COBLL1Q53SF7 1204 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 C1orf220Q5T0J3 134 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 SDHAF4Q5VUM1 108 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 ASTLQ6HA08 431 aaPredicted RBP25.62■■□□□ 1.69
SMKR1-201ENST00000462322 EEF2KMTQ96G04 330 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 GCNAQ96QF7 691 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 TSG101Q99816 390 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 KCNH6Q9H252 994 aa25.62■■□□□ 1.69
SMKR1-201ENST00000462322 MAGEC2Q9UBF1 373 aaPredicted RBP25.62■■□□□ 1.69
SMKR1-201ENST00000462322 CETN3O15182 167 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 NPR3P17342 541 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 CDC25CP30307 473 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 STXBP5Q5T5C0 1151 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 IER5LQ5T953 404 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 ISM2Q6H9L7 571 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 SCN4BQ8IWT1 228 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 MYLPFQ96A32 169 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 ELMO3Q96BJ8 720 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 SMYD3Q9H7B4 428 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 ARHGEF3Q9NR81 526 aa25.61■■□□□ 1.69
SMKR1-201ENST00000462322 A8MXQ7 604 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 CSH1P0DML2 217 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 CSH2P0DML3 217 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 VIPR2P41587 438 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 PIK3CAP42336 1068 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 GCLMP48507 274 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 CLCN5P51795 746 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 PFKPQ01813 784 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 CYP27A1Q02318 531 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 ENPEPQ07075 957 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 MDH1BQ5I0G3 518 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 GPR158Q5T848 1215 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 SCARA5Q6ZMJ2 495 aa25.6■■□□□ 1.69
SMKR1-201ENST00000462322 ADSSL1Q8N142 457 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms