RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SLC30A5Q8TAD4 765 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 STK32AQ8WU08 396 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 CYFIP2Q96F07 1278 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 FUBP3Q96I24 572 aaKnown RBP eCLIP11.34□□□□□ -0.59
RTF1-202ENST00000462276 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 EIF3CQ99613 913 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 CHP1Q99653 195 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 UBXN6Q9BZV1 441 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 ABCB6Q9NP58 842 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 HESX1Q9UBX0 185 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 ADAMTS1Q9UHI8 967 aa11.34□□□□□ -0.59
RTF1-202ENST00000462276 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
RTF1-202ENST00000462276 F8W810 466 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 CCP110O43303 1012 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 NDUFA10O95299 355 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 PNMA6AP0CW24 399 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 CTSAP10619 480 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 CDH5P33151 784 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 CTNNB1P35222 781 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 PBX3P40426 434 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 KIF11P52732 1056 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 CCZ1BP86790 482 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 CCZ1P86791 482 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 KIAA0319Q5VV43 1072 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 TPGS2Q68CL5 300 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 ALKBH5Q6P6C2 394 aaKnown RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 OSTM1Q86WC4 334 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 TMEM173Q86WV6 379 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 VPS52Q8N1B4 723 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 ANKRD52Q8NB46 1076 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 KLHL23Q8NBE8 558 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 BCL7CQ8WUZ0 217 aaPredicted RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 CEP295NLQ96MC4 621 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 TWNKQ96RR1 684 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTF1-202ENST00000462276 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
RTF1-202ENST00000462276 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 NAGPAQ9UK23 515 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTF1-202ENST00000462276 IRAK3Q9Y616 596 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 ALPK3Q96L96 1907 aa11.33□□□□□ -0.6
RTF1-202ENST00000462276 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.62e-15■■□□□ 11.6
RTF1-202ENST00000462276 CYP1A1P04798 512 aaPredicted RBP11.32□□□□□ -0.6
RTF1-202ENST00000462276 CA3P07451 260 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 CHRNB2P17787 502 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 BRD2P25440 801 aaKnown RBP11.32□□□□□ -0.6
RTF1-202ENST00000462276 RABGGTBP53611 331 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 BCAT1P54687 386 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 FMO1Q01740 532 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 GPR17Q13304 367 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 PSMD5Q16401 504 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 CFAP221Q4G0U5 840 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 VSTM1Q6UX27 236 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 RTL10Q7L3V2 364 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 RIN2Q8WYP3 895 aaPredicted RBP11.32□□□□□ -0.6
RTF1-202ENST00000462276 TFAP2BQ92481 460 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
RTF1-202ENST00000462276 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 PRO3102Q9H379 93 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 SLC28A3Q9HAS3 691 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 RXFP1Q9HBX9 757 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 ANK1P16157 1881 aa11.32□□□□□ -0.6
RTF1-202ENST00000462276 A0A087X0T9 212 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 GOLGA6L9A6NEM1 432 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 SOWAHDA6NJG2 315 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 LPXNO60711 386 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 LILRB3O75022 631 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 RTN2O75298 545 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 MMEP08473 750 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 PLEKP08567 350 aaPredicted RBP11.31□□□□□ -0.6
RTF1-202ENST00000462276 CCDC175P0C221 793 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 FAM228BP0C875 321 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 MYBL1P10243 752 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 UNGP13051 313 aaPredicted RBP11.31□□□□□ -0.6
RTF1-202ENST00000462276 MAGEA11P43364 429 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 ACADSBP45954 432 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 NSFP46459 744 aaKnown RBP11.31□□□□□ -0.6
RTF1-202ENST00000462276 TAP1Q03518 808 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 RAB33AQ14088 237 aa11.31□□□□□ -0.6
RTF1-202ENST00000462276 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms