RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PDGFRBP09619 1106 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 WEE2P0C1S8 567 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ZNF18P17022 549 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MTHFRP42898 656 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TUFMP49411 452 aaKnown RBP12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 DUSP4Q13115 394 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CUL2Q13617 745 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MIIPQ5JXC2 388 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ATAT1Q5SQI0 421 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TMC5Q6UXY8 1006 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 GPR149Q86SP6 731 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LRRTM3Q86VH5 581 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 DHX40Q8IX18 779 aaKnown RBP12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LMO3Q8TAP4 145 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SUSD6Q92537 303 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 FAM81BQ96LP2 452 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PRKD2Q9BZL6 878 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 GTF3C4Q9UKN8 822 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 USP15Q9Y4E8 981 aaPredicted RBP12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 YIPF1Q9Y548 306 aa12.44□□□□□ -0.42
TRAF3IP1-204ENST00000462122 VCANP13611 3396 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MYBPHLA2RUH7 354 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 HCRTO43612 131 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CILPO75339 1184 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 VNN2O95498 520 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PTPN1P18031 435 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CDK11BP21127 795 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 NDST1P52848 882 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TPM4P67936 248 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 GCNT1Q02742 428 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LRMPQ12912 555 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CBX2Q14781 532 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 KRT31Q15323 416 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SMAD2Q15796 467 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SMYD5Q6GMV2 418 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SPATA2LQ8IUW3 424 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PPM1KQ8N3J5 372 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 C12orf76Q8N812 135 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ATAD1Q8NBU5 361 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SMG7Q92540 1137 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TATDN2Q93075 761 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ZNF707Q96C28 371 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 APOL5Q9BWW9 433 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 NT5C1AQ9BXI3 368 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PIDD1Q9HB75 910 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CISHQ9NSE2 258 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TMLHEQ9NVH6 421 aa12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LIMA1Q9UHB6 759 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LRRC10BA6NIK2 292 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ATP2C2O75185 946 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CD58P19256 250 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ALDH1A3P47895 512 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TWF1Q12792 350 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 IQCB1Q15051 598 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 FKBP15Q5T1M5 1219 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 VSTM1Q6UX27 236 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CRYBG2Q8N1P7 616 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ELMOD1Q8N336 334 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 JAKMIP2Q96AA8 810 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PCED1BQ96HM7 432 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ARID3AQ99856 593 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CRACR2AQ9BSW2 395 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 HSD3B7Q9H2F3 369 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CRISPLD1Q9H336 500 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 DPEP3Q9H4B8 488 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 HMGXB4Q9UGU5 601 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
TRAF3IP1-204ENST00000462122 ATP8B3O60423 1300 aa12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 CCL16O15467 120 aa12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 HAPLN1P10915 354 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 PON1P27169 355 aa12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 MAGEA11P43364 429 aa12.41□□□□□ -0.42
TRAF3IP1-204ENST00000462122 KCNQ1P51787 676 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms