RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 WEE1P30291 646 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 CDC25CP30307 473 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 MAGEA9P43362 315 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 LHX1P48742 406 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 CYP2J2P51589 502 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 FCHO2Q0JRZ9 810 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 DPH6Q7L8W6 267 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 GPIHBP1Q8IV16 184 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 ADGRF2Q8IZF7 708 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 MAML2Q8IZL2 1156 aaPredicted RBP20.34■□□□□ 0.85
VARS-220ENST00000461874 XXYLT1Q8NBI6 393 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 PAGE5Q96GU1 130 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 PI4K2AQ9BTU6 479 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 TASP1Q9H6P5 420 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 ABCB6Q9NP58 842 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 CGNQ9P2M7 1197 aaKnown RBP20.34■□□□□ 0.85
VARS-220ENST00000461874 ZDHHC9Q9Y397 364 aa20.34■□□□□ 0.85
VARS-220ENST00000461874 CHADO15335 359 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 NCAM2O15394 837 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 KLRC4O43908 158 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 DLATP10515 647 aaKnown RBP20.33■□□□□ 0.85
VARS-220ENST00000461874 HMGA1P17096 107 aaKnown RBP20.33■□□□□ 0.85
VARS-220ENST00000461874 CMA1P23946 247 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 PCSK1P29120 753 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 CYP4F8P98187 520 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 CYP24A1Q07973 514 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 FZD5Q13467 585 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 PSMD6Q15008 389 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 KNOP1Q1ED39 458 aaKnown RBP20.33■□□□□ 0.85
VARS-220ENST00000461874 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 C12orf56Q8IXR9 622 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 YAF2Q8IY57 180 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 ZNF687Q8N1G0 1237 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 LRRC3BQ96PB8 259 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 GCNAQ96QF7 691 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 SPATA6Q9NWH7 488 aaPredicted RBP20.33■□□□□ 0.85
VARS-220ENST00000461874 OBP2AQ9NY56 170 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 GTF3C4Q9UKN8 822 aa20.33■□□□□ 0.85
VARS-220ENST00000461874 TCHHQ07283 1943 aa20.33■□□□□ 0.84
VARS-220ENST00000461874 DPYSL4O14531 572 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 HCRTO43612 131 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 PFKFB1P16118 471 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 TNNI1P19237 187 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 CYP2F1P24903 491 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 RPS9P46781 194 aaKnown RBP20.32■□□□□ 0.84
VARS-220ENST00000461874 GPR15P49685 360 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 MLLT6P55198 1093 aaPredicted RBP20.32■□□□□ 0.84
VARS-220ENST00000461874 TMEM150AQ86TG1 271 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 KBTBD7Q8WVZ9 684 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 CHAMP1Q96JM3 812 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 SPATA32Q96LK8 384 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 FNBP1Q96RU3 617 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 CGRRF1Q99675 332 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 SLC46A2Q9BY10 475 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 PIAS3Q9Y6X2 628 aa20.32■□□□□ 0.84
VARS-220ENST00000461874 A0A1B0GVL5 298 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 MYBPHLA2RUH7 354 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 PRAMEF12O95522 483 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 F11P03951 625 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 NLRP12P59046 1061 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 RPL10AP62906 217 aaKnown RBP20.31■□□□□ 0.84
VARS-220ENST00000461874 KRT85P78386 507 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 DDR2Q16832 855 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 CCDC142Q17RM4 750 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 SDHAF4Q5VUM1 108 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 FAM171BQ6P995 826 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 FAM3CQ92520 227 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 CCDC127Q96BQ5 260 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 SEMA4AQ9H3S1 761 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 USP25Q9UHP3 1055 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 HPSEQ9Y251 543 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 R4GN57 208 aa20.31■□□□□ 0.84
VARS-220ENST00000461874 CFAP54Q96N23 3096 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 GVINP1Q7Z2Y8 2422 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 LAMTOR5O43504 91 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 CST3P01034 146 aaPredicted RBP20.3■□□□□ 0.84
VARS-220ENST00000461874 CSH1P0DML2 217 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 CSH2P0DML3 217 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 LMO2P25791 158 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 STK4Q13043 487 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 PSMD2Q13200 908 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 ZNF528Q3MIS6 628 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 CFAP221Q4G0U5 840 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 SPATA2LQ8IUW3 424 aaPredicted RBP20.3■□□□□ 0.84
VARS-220ENST00000461874 GOLGA5Q8TBA6 731 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 CSGALNACT1Q8TDX6 532 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 FUBP3Q96I24 572 aaKnown RBP eCLIP20.3■□□□□ 0.84
VARS-220ENST00000461874 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
VARS-220ENST00000461874 EXOC1Q9NV70 894 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 FBXO4Q9UKT5 387 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 CDH9Q9ULB4 789 aa20.3■□□□□ 0.84
VARS-220ENST00000461874 NDRG2Q9UN36 371 aaKnown RBP20.3■□□□□ 0.84
VARS-220ENST00000461874 EP300Q09472 2414 aaPredicted RBP20.29■□□□□ 0.84
VARS-220ENST00000461874 MIA3Q5JRA6 1907 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 EXOC3O60645 756 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 ATP2C2O75185 946 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 WARSP23381 471 aaKnown RBP20.29■□□□□ 0.84
VARS-220ENST00000461874 KMT5BQ4FZB7 885 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 ARHGAP29Q52LW3 1261 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms