RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SPATA18Q8TC71 538 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ELSPBP1Q96BH3 223 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PGLYRP2Q96PD5 576 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 KXD1Q9BQD3 176 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZFP14Q9HCL3 533 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ARMCX3Q9UH62 379 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 RWDD2AQ9UIY3 292 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SNX9Q9Y5X1 595 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DOCK8Q8NF50 2099 aa14.19□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PI15O43692 258 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CLSTN1O94985 981 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 STAU1O95793 577 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GNA14O95837 355 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MYL4P12829 197 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 P4HA1P13674 534 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 LHX1P48742 406 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TUFMP49411 452 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 STX17P56962 302 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 NLRP12P59046 1061 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MCCD1P59942 119 aaPredicted RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DLG4P78352 724 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MYL7Q01449 175 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DUSP4Q13115 394 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 WDR72Q3MJ13 1102 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZACNQ401N2 412 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SLC44A4Q53GD3 710 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TDRD10Q5VZ19 366 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 WSCD1Q658N2 575 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TTI2Q6NXR4 508 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SV2AQ7L0J3 742 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FRMD5Q7Z6J6 570 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TOP6BLQ8N6T0 577 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CCDC150Q8NCX0 1101 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TAF4BQ92750 862 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 EEF2KMTQ96G04 330 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MMS19Q96T76 1030 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 RPP25Q9BUL9 199 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FAM86C1Q9NVL1 165 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 HSFX1Q9UBD0 423 aa14.18□□□□□ -0.14
RAB11FIP3-207ENST00000461009 NCAM2O15394 837 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 OR4Q2P0C623 313 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CEBPBP17676 345 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 STARD6P59095 220 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MYL6P60660 151 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TNNC1P63316 161 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 NCOA4Q13772 614 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ANGPT1Q15389 498 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MLF2Q15773 248 aaPredicted RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TAF12Q16514 161 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TPD52L1Q16890 204 aaPredicted RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SLC5A9Q2M3M2 681 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZNF667Q5HYK9 610 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PRSS36Q5K4E3 855 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TCERG1LQ5VWI1 586 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SASS6Q6UVJ0 657 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DCP1BQ8IZD4 617 aaKnown RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 C2orf15Q8WU43 125 aaKnown RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 E2F7Q96AV8 911 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 NELL2Q99435 816 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 DUSP9Q99956 384 aaKnown RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 IMPG2Q9BZV3 1241 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GZF1Q9H116 711 aaPredicted RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TMEM8AQ9HCN3 771 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 MRPS17Q9Y2R5 130 aaKnown RBP14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 YIPF1Q9Y548 306 aa14.17□□□□□ -0.14
RAB11FIP3-207ENST00000461009 KANSL1LA0AUZ9 987 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GFRA3O60609 400 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TRIM49P0CI25 452 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TRIM49CP0CI26 452 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 CCDC192P0DO97 292 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PCSK1P29120 753 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PIK3CAP42336 1068 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GCLMP48507 274 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TSPY1Q01534 308 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SOWAHAQ2M3V2 549 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ARHGAP15Q53QZ3 475 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 KRT39Q6A163 491 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ADGRF2Q8IZF7 708 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 GCNAQ96QF7 691 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 PHOX2BQ99453 314 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 ACBD6Q9BR61 282 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 TRMT61BQ9BVS5 477 aaKnown RBP14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 BCO2Q9BYV7 579 aa14.16□□□□□ -0.14
RAB11FIP3-207ENST00000461009 SNX25Q9H3E2 840 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms