RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 RARS2Q5T160 578 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 OSTM1Q86WC4 334 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 TTC39CQ8N584 583 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 SLC7A14Q8TBB6 771 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SUSD6Q92537 303 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 RIPOR3Q96MK2 946 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 BCO2Q9BYV7 579 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SMYD3Q9H7B4 428 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 CYP3A43Q9HB55 503 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 CDH9Q9ULB4 789 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 POLIQ9UNA4 740 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 NFE2L3Q9Y4A8 694 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 USP15Q9Y4E8 981 aaPredicted RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 MTMR11A4FU01 709 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 GRXCR2A6NFK2 248 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 MBTPS2O43462 519 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 XYLBO75191 536 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SPATA31D3P0C874 917 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 ADCY1Q08828 1119 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 PLD1Q13393 1074 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SMAD2Q15796 467 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 SLC39A12Q504Y0 691 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SPATA31D4Q6ZUB0 917 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 GPR149Q86SP6 731 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SPPL2BQ8TCT7 592 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SEMA4DQ92854 862 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 BPIFA3Q9BQP9 254 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 SYT15Q9BQS2 421 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 PI4K2AQ9BTU6 479 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 DNAJC25Q9H1X3 360 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 APOBEC3GQ9HC16 384 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 ABCB6Q9NP58 842 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
APTX-209ENST00000460940 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
APTX-209ENST00000460940 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 ATAT1Q5SQI0 421 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 UNC93AQ86WB7 457 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 C12orf76Q8N812 135 aaPredicted RBP11.82□□□□□ -0.52
APTX-209ENST00000460940 OR6B3Q8NGW1 331 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 TMEM209Q96SK2 561 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 PKMYT1Q99640 499 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 RASSF4Q9H2L5 321 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 INSL5Q9Y5Q6 135 aa11.82□□□□□ -0.52
APTX-209ENST00000460940 MTCL1Q9Y4B5 1905 aaKnown RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 GTPBP10A4D1E9 387 aaKnown RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 A8MXQ7 604 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 KCNJ18B7U540 433 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 RFPL2O75678 378 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 VNN2O95498 520 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 CAVIN2O95810 425 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 LRG1P02750 347 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 TBXAS1P24557 533 aaPredicted RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 NOP2P46087 812 aaKnown RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 KCNQ1P51787 676 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 KCNJ12Q14500 433 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 CBX2Q14781 532 aaPredicted RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 TMC5Q6UXY8 1006 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 C4orf50Q6ZRC1 276 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 ZNF707Q96C28 371 aaPredicted RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 FUBP3Q96I24 572 aaKnown RBP eCLIP11.81□□□□□ -0.52
APTX-209ENST00000460940 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 C16orf45Q96MC5 204 aaPredicted RBP11.81□□□□□ -0.52
APTX-209ENST00000460940 PGLYRP2Q96PD5 576 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 YIPF1Q9Y548 306 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
APTX-209ENST00000460940 SEC24AO95486 1093 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 CDC25BP30305 580 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 TUFMP49411 452 aaKnown RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 YWHAEP62258 255 aaKnown RBP11.8□□□□□ -0.52
APTX-209ENST00000460940 CFAP221Q4G0U5 840 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
APTX-209ENST00000460940 TEX35Q5T0J7 233 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms