RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 THOC5Q13769 683 aaKnown RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 C16orf89Q6UX73 402 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 LRRC55Q6ZSA7 311 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 GPRC5AQ8NFJ5 357 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 PGM2Q96G03 612 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 NR1H4Q96RI1 486 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SENP7Q9BQF6 1050 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 MMADHCQ9H3L0 296 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SAR1AQ9NR31 198 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 AGPAT5Q9NUQ2 364 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 PSMC3IPQ9P2W1 217 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 IGSF9BQ9UPX0 1349 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 C16orf96A6NNT2 1141 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SORBS3O60504 671 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF189O75820 626 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 FESP07332 822 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CCDC159P0C7I6 412 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ALDH5A1P51649 535 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 MRPS15P82914 257 aaKnown RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SPIRE1Q08AE8 756 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 TMEM132BQ14DG7 1078 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 TRIP10Q15642 601 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 NFIL3Q16649 462 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 KAZNQ674X7 775 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CRYGNQ8WXF5 182 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CCDC127Q96BQ5 260 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 WARS2Q9UGM6 360 aaKnown RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 BAG5Q9UL15 447 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CCDC85CA6NKD9 419 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 HSPA4LO95757 839 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CLPTM1O96005 669 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SERPINB1P30740 379 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 FMO5P49326 533 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 NPEPPSP55786 919 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 KRT17Q04695 432 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 TRIP13Q15645 432 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 TTMPQ5BVD1 217 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 PDZD4Q76G19 769 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 PATL1Q86TB9 770 aaKnown RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SETD3Q86TU7 594 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-202ENST00000460333 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 NUDCD3Q8IVD9 361 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 HIPK4Q8NE63 616 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ATL2Q8NHH9 583 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 AGAP11Q8TF27 550 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 HSPBP1Q9NZL4 362 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 CIDEBQ9UHD4 219 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF229Q9UJW7 825 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 DNAJC12Q9UKB3 198 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
VPS13D-202ENST00000460333 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ZBBXA8MT70 800 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 CFLARO15519 480 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SERPINI2O75830 405 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 NPTXRO95502 500 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 EGFRP00533 1210 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TFRCP02786 760 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 OATP04181 439 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 HMOX2P30519 316 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 GSTT1P30711 240 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 FNTAP49354 379 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 RAP1GDS1P52306 607 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 INHBEP58166 350 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 BBS9Q3SYG4 887 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ZC2HC1CQ53FD0 456 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 WLSQ5T9L3 541 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 IZUMO3Q5VZ72 239 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ENOSF1Q7L5Y1 443 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 EEPD1Q7L9B9 569 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 RFX6Q8HWS3 928 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 GPD1LQ8N335 351 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 PSPC1Q8WXF1 523 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 MPP4Q96JB8 637 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 INPP4AQ96PE3 977 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TRIM51Q9BSJ1 452 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 KLHL4Q9C0H6 718 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 INTS2Q9H0H0 1204 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ING2Q9H160 280 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ASCC2Q9H1I8 757 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SMARCAD1Q9H4L7 1026 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 NPHS2Q9NP85 383 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 CYP26B1Q9NR63 512 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ZNF536O15090 1300 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 KLHL33A6NCF5 533 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SPDYE5A6NIY4 337 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 B2RBV5 119 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 F8VZ95 297 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 H7C0C1 242 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 OPLAHO14841 1288 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 ENO1P06733 434 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 DLATP10515 647 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 RARGP13631 454 aa6.48□□□□□ -1.37
VPS13D-202ENST00000460333 TARSP26639 723 aaKnown RBP6.48□□□□□ -1.37
VPS13D-202ENST00000460333 SLC1A1P43005 524 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms