RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 SOWAHAQ2M3V2 549 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 GPIHBP1Q8IV16 184 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 ARID3BQ8IVW6 561 aaPredicted RBP22.42■■□□□ 1.18
SRM-202ENST00000459997 C1orf210Q8IVY1 113 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 YAF2Q8IY57 180 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 CCDC127Q96BQ5 260 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 NELL2Q99435 816 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 CGRRF1Q99675 332 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 IL21Q9HBE4 155 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 EXOC1Q9NV70 894 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 CGNQ9P2M7 1197 aaKnown RBP22.42■■□□□ 1.18
SRM-202ENST00000459997 GTF3C4Q9UKN8 822 aa22.42■■□□□ 1.18
SRM-202ENST00000459997 NUP210Q8TEM1 1887 aaPredicted RBP22.42■■□□□ 1.18
SRM-202ENST00000459997 GABRDO14764 452 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 HCRTO43612 131 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 KLRC4O43908 158 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 TARSP26639 723 aaKnown RBP22.41■■□□□ 1.18
SRM-202ENST00000459997 PCSK1P29120 753 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 BECN1Q14457 450 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 ASCL5Q7RTU5 278 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 TRAPPC11Q7Z392 1133 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 C12orf56Q8IXR9 622 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 PKMYT1Q99640 499 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 TRPV5Q9NQA5 729 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 USP25Q9UHP3 1055 aa22.41■■□□□ 1.18
SRM-202ENST00000459997 MRPS17Q9Y2R5 130 aaKnown RBP22.41■■□□□ 1.18
SRM-202ENST00000459997 PRR23AA6NEV1 266 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 DPYSL4O14531 572 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 CYP2F1P24903 491 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 GPR15P49685 360 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 CCDC142Q17RM4 750 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 DPH6Q7L8W6 267 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 STKLD1Q8NE28 680 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 NKD2Q969F2 451 aaPredicted RBP22.4■■□□□ 1.18
SRM-202ENST00000459997 TASP1Q9H6P5 420 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 ABCB6Q9NP58 842 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 SPATA6Q9NWH7 488 aaPredicted RBP22.4■■□□□ 1.18
SRM-202ENST00000459997 HPSEQ9Y251 543 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 PIAS3Q9Y6X2 628 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 VPS13AQ96RL7 3174 aa22.4■■□□□ 1.18
SRM-202ENST00000459997 PATJQ8NI35 1801 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 SHISA7A6NL88 538 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 MAN2B1O00754 1011 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 NCAM2O15394 837 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 EXOC3O60645 756 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 FCHO2Q0JRZ9 810 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 STK4Q13043 487 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 KMT5BQ4FZB7 885 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 SDHAF4Q5VUM1 108 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 SPATA2LQ8IUW3 424 aaPredicted RBP22.39■■□□□ 1.17
SRM-202ENST00000459997 GOLGA5Q8TBA6 731 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 KBTBD7Q8WVZ9 684 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 MMS19Q96T76 1030 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 NDRG2Q9UN36 371 aaKnown RBP22.39■■□□□ 1.17
SRM-202ENST00000459997 MAGED2Q9UNF1 606 aaPredicted RBP22.39■■□□□ 1.17
SRM-202ENST00000459997 ATP6V1DQ9Y5K8 247 aa22.39■■□□□ 1.17
SRM-202ENST00000459997 ARNTLO00327 626 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 CHADO15335 359 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 PRAMEF12O95522 483 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 CSH1P0DML2 217 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 CSH2P0DML3 217 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 HMGA1P17096 107 aaKnown RBP22.38■■□□□ 1.17
SRM-202ENST00000459997 MAGEA9P43362 315 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 RPL10AP62906 217 aaKnown RBP22.38■■□□□ 1.17
SRM-202ENST00000459997 PSMD2Q13200 908 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 DDR2Q16832 855 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 LIMS2Q7Z4I7 341 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 KIAA0895Q8NCT3 520 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 CSGALNACT1Q8TDX6 532 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 CLDN23Q96B33 292 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 SYT15Q9BQS2 421 aa22.38■■□□□ 1.17
SRM-202ENST00000459997 MYBPHLA2RUH7 354 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 ATP2C2O75185 946 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 CST3P01034 146 aaPredicted RBP22.37■■□□□ 1.17
SRM-202ENST00000459997 SP9P0CG40 484 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 LMO2P25791 158 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 WEE1P30291 646 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 SYKP43405 635 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 NDUFA8P51970 172 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 NLRP12P59046 1061 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 PSMC1P62191 440 aaKnown RBP22.37■■□□□ 1.17
SRM-202ENST00000459997 CFAP221Q4G0U5 840 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 TMEM150AQ86TG1 271 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 LRRC3BQ96PB8 259 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 SLC46A2Q9BY10 475 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 GZF1Q9H116 711 aaPredicted RBP22.37■■□□□ 1.17
SRM-202ENST00000459997 OBP2AQ9NY56 170 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 CDH9Q9ULB4 789 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 R4GN57 208 aa22.37■■□□□ 1.17
SRM-202ENST00000459997 LAMTOR5O43504 91 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 F11P03951 625 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 MYL1P05976 194 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 WARSP23381 471 aaKnown RBP22.36■■□□□ 1.17
SRM-202ENST00000459997 RPS9P46781 194 aaKnown RBP22.36■■□□□ 1.17
SRM-202ENST00000459997 FAM171BQ6P995 826 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 SCN4BQ8IWT1 228 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 MAML2Q8IZL2 1156 aaPredicted RBP22.36■■□□□ 1.17
SRM-202ENST00000459997 FAM3CQ92520 227 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 ZNF516Q92618 1163 aa22.36■■□□□ 1.17
SRM-202ENST00000459997 FUBP3Q96I24 572 aaKnown RBP eCLIP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms