RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ATICP31939 592 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 STARD6P59095 220 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 RPL10AP62906 217 aaKnown RBP17.26■□□□□ 0.35
COL7A1-203ENST00000459756 TNNC1P63316 161 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 TCF15Q12870 199 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 NFIL3Q16649 462 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 WDR72Q3MJ13 1102 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 ARHGAP15Q53QZ3 475 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 FAM171BQ6P995 826 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 SPATA2LQ8IUW3 424 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-203ENST00000459756 PLEKHO2Q8TD55 490 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 GIPC2Q8TF65 315 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 E2F7Q96AV8 911 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 FUBP3Q96I24 572 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL7A1-203ENST00000459756 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 PI4K2AQ9BTU6 479 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 TRMT61BQ9BVS5 477 aaKnown RBP17.26■□□□□ 0.35
COL7A1-203ENST00000459756 ATXN3LQ9H3M9 355 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 CDH9Q9ULB4 789 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 FRMD4BQ9Y2L6 1034 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 MYBPHLA2RUH7 354 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-203ENST00000459756 MAPK13O15264 365 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 HCRTO43612 131 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 PI15O43692 258 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 TACC1O75410 805 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 PSMC3P17980 439 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 LMO2P25791 158 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 MYL6P60660 151 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 PRKCQQ04759 706 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 BIRC3Q13489 604 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
COL7A1-203ENST00000459756 MAPRE1Q15691 268 aaKnown RBP17.25■□□□□ 0.35
COL7A1-203ENST00000459756 MLF2Q15773 248 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-203ENST00000459756 SLC44A4Q53GD3 710 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 TDRD10Q5VZ19 366 aaKnown RBP17.25■□□□□ 0.35
COL7A1-203ENST00000459756 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 TMC2Q8TDI7 906 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 DEPDC1BQ8WUY9 529 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 SYT15Q9BQS2 421 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 XYLT2Q9H1B5 865 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 VRTNQ9H8Y1 702 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 IL21Q9HBE4 155 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 RMND1Q9NWS8 449 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 ZMYM5Q9UJ78 669 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
COL7A1-203ENST00000459756 IKBKBO14920 756 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 C4BPAP04003 597 aaKnown RBP17.24■□□□□ 0.35
COL7A1-203ENST00000459756 NR2F2P24468 414 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 CYP2F1P24903 491 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 RPL13P26373 211 aaKnown RBP17.24■□□□□ 0.35
COL7A1-203ENST00000459756 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
COL7A1-203ENST00000459756 VIPR2P41587 438 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 PNOCQ13519 176 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 NCOA4Q13772 614 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 GPR158Q5T848 1215 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 VITQ6UXI7 678 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 CCDC105Q8IYK2 499 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 DNASE1L2Q92874 299 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 TASP1Q9H6P5 420 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 BRD9Q9H8M2 597 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 NXF1Q9UBU9 619 aaKnown RBP17.24■□□□□ 0.35
COL7A1-203ENST00000459756 HOOK1Q9UJC3 728 aaKnown RBP17.24■□□□□ 0.35
COL7A1-203ENST00000459756 SIT1Q9Y3P8 196 aa17.24■□□□□ 0.35
COL7A1-203ENST00000459756 ATP2C2O75185 946 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 SMC2O95347 1197 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CSH1P0DML2 217 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CSH2P0DML3 217 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 HMGA1P17096 107 aaKnown RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 WEE1P30291 646 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MAGEA11P43364 429 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 DLG4P78352 724 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 GRM2Q14416 872 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CCDC142Q17RM4 750 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 ZNF699Q32M78 642 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 ARID3BQ8IVW6 561 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MFSD6LQ8IWD5 586 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 IRF7Q92985 503 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MYLPFQ96A32 169 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 GSDMAQ96QA5 445 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MRPL45Q9BRJ2 306 aaKnown RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MKNK1Q9BUB5 465 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 DDX23Q9BUQ8 820 aaKnown RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CRTAC1Q9NQ79 661 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 TRPV5Q9NQA5 729 aa17.23■□□□□ 0.35
COL7A1-203ENST00000459756 MAGEC2Q9UBF1 373 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CIZ1Q9ULV3 898 aaPredicted RBP17.23■□□□□ 0.35
COL7A1-203ENST00000459756 CACNA1HO95180 2353 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 KANSL1LA0AUZ9 987 aa17.22■□□□□ 0.35
COL7A1-203ENST00000459756 HEPACAM2A8MVW5 462 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms