RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 KRT13P13646 458 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 WARSP23381 471 aaKnown RBP18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 NR2F2P24468 414 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 CDC25CP30307 473 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 CLDN10P78369 228 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 INTS8Q75QN2 995 aaKnown RBP18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 LRRTM3Q86VH5 581 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 SMARCD2Q92925 531 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 SMARCE1Q969G3 411 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 ASB16Q96NS5 453 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 KXD1Q9BQD3 176 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 ATXN3LQ9H3M9 355 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 MAPK8IP1Q9UQF2 711 aa18.76■□□□□ 0.59
SCARNA2-201ENST00000458748 LRRIQ3A6PVS8 624 aaPredicted RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 PI15O43692 258 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TACC1O75410 805 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 CST3P01034 146 aaPredicted RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 PSMC2P35998 433 aaKnown RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 STARD6P59095 220 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 PRKCQQ04759 706 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 ENPEPQ07075 957 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 PNOCQ13519 176 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 SNW1Q13573 536 aaKnown RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 EDRF1Q3B7T1 1238 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 CFAP221Q4G0U5 840 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 FAM78AQ5JUQ0 283 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TANGO2Q6ICL3 276 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 POTEHQ6S545 545 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 LIMS2Q7Z4I7 341 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TMC8Q8IU68 726 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 ELOA2Q8IYF1 753 aaPredicted RBP18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 ENGASEQ8NFI3 743 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TAF4BQ92750 862 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 FAM84AQ96KN4 292 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TSG101Q99816 390 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 SYT15Q9BQS2 421 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TBC1D17Q9HA65 648 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 TRPV4Q9HBA0 871 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 GTF3C4Q9UKN8 822 aa18.75■□□□□ 0.59
SCARNA2-201ENST00000458748 A0A1W2PRU2 124 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 GFRA3O60609 400 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 CSH1P0DML2 217 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 CSH2P0DML3 217 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 FCARP24071 287 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ACAT1P24752 427 aaKnown RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 GABRR2P28476 465 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 GNL1P36915 607 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 VAMP7P51809 220 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ADAM9Q13443 819 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 STIM1Q13586 685 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 NCOA4Q13772 614 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 TEAD2Q15562 447 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 SGSM1Q2NKQ1 1148 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZNF699Q32M78 642 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZNF667Q5HYK9 610 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 TTC9BQ8N6N2 239 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 CCDC150Q8NCX0 1101 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 OR6B3Q8NGW1 331 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 SHKBP1Q8TBC3 707 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZSCAN18Q8TBC5 510 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 DEPDC1BQ8WUY9 529 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZNF516Q92618 1163 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 VRTNQ9H8Y1 702 aa18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 MAGEC2Q9UBF1 373 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 UXTQ9UBK9 157 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
SCARNA2-201ENST00000458748 STX10O60499 249 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 SOAT2O75908 522 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 ATF6P18850 670 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 PPP1R2P41236 205 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 MAGEA11P43364 429 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 CASP4P49662 377 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 MYL6P60660 151 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 SLC44A4Q53GD3 710 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 TDRD10Q5VZ19 366 aaKnown RBP18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 OSTM1Q86WC4 334 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 CCDC105Q8IYK2 499 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 FAM186BQ8IYM0 893 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 KBTBD7Q8WVZ9 684 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 CEP295NLQ96MC4 621 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 ZSWIM3Q96MP5 696 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 LPIN3Q9BQK8 851 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 TRMT61BQ9BVS5 477 aaKnown RBP18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 PLA2G2FQ9BZM2 168 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 DNAI2Q9GZS0 605 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 EHD2Q9NZN4 543 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 NXF1Q9UBU9 619 aaKnown RBP18.73■□□□□ 0.59
SCARNA2-201ENST00000458748 SOBPA7XYQ1 873 aa18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 DPYSL4O14531 572 aa18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 CETN3O15182 167 aa18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 C4BPAP04003 597 aaKnown RBP18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 EPB41P11171 864 aaKnown RBP18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 GJA1P17302 382 aa18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 PSMC3P17980 439 aa18.72■□□□□ 0.59
SCARNA2-201ENST00000458748 DDX6P26196 483 aaKnown RBP eCLIP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms