RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TFDP3Q5H9I0 405 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 CEP128Q6ZU80 1094 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 POLNQ7Z5Q5 900 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 NKD2Q969F2 451 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 FAXDC2Q96IV6 333 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 SDCBP2Q9H190 292 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 RPF1Q9H9Y2 349 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 PDGFCQ9NRA1 345 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 ZNF148Q9UQR1 794 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 MCM3APO60318 1980 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 C22orf31O95567 290 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ABHD2P08910 425 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 CETPP11597 493 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 RFC1P35251 1148 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 RAP1GAPP47736 663 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 RAD23BP54727 409 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 VCPP55072 806 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 LACTB2Q53H82 288 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ANKRD20A8PQ5CZ79 823 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ZFYVE27Q5T4F4 411 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ARFGAP1Q8N6T3 406 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 RBM15Q96T37 977 aaKnown RBP eCLIP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 RNPEPQ9H4A4 650 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 CXorf56Q9H5V9 222 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 EURLQ9NYK6 297 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 TMEM120BA0PK00 339 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 MED7O43513 233 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ITGBL1O95965 494 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ZSCAN5DPP0CG00 497 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 MAGEA4P43358 317 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 POU5F1BQ06416 359 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 STAT4Q14765 748 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ZNF667Q5HYK9 610 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 CYP4X1Q8N118 509 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 C1orf127Q8N9H9 656 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 CCDC197Q8NCU1 140 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 CXorf38Q8TB03 319 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 C9orf72Q96LT7 481 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 MROH8Q9H579 483 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 TJP2Q9UDY2 1190 aa19.37■□□□□ 0.69
SEMA3B-209ENST00000456560 LRRD1A4D1F6 860 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 DNM1LO00429 736 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 CD19P15391 556 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 POLR2BP30876 1174 aaKnown RBP19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 SLC25A11Q02978 314 aaKnown RBP19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 SPRED3Q2MJR0 410 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 JOSD2Q8TAC2 188 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 CCT6BQ92526 530 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 P3H4Q92791 437 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 IFT122Q9HBG6 1241 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 PRMT7Q9NVM4 692 aaPredicted RBP19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 TPX2Q9ULW0 747 aaKnown RBP19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 NAALADL1Q9UQQ1 740 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 EFR3BQ9Y2G0 817 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 LACTBL1A8MY62 500 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 ITGAVP06756 1048 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 NFICP08651 508 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 KRT3P12035 628 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 ETS1P14921 441 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 OSBPP22059 807 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 ARSEP51690 589 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 CDH8P55286 799 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 TTLL4Q14679 1199 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 TMEM132AQ24JP5 1023 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 WDR72Q3MJ13 1102 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 ZNF484Q5JVG2 852 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 USP50Q70EL3 339 aaPredicted RBP19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 TMEM130Q8N3G9 435 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 SLC35B2Q8TB61 432 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 FNIP1Q8TF40 1166 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 KDM4CQ9H3R0 1056 aa19.36■□□□□ 0.69
SEMA3B-209ENST00000456560 FOXO6A8MYZ6 492 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 GOLGA8SH3BPF8 625 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 KRT19P08727 400 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 STAG3L1P0CL83 205 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 PSMA2P25787 234 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 IFNAR2P48551 515 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 MPP2Q14168 576 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 ITIH4Q14624 930 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 AMHR2Q16671 573 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 IFNLR1Q8IU57 520 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 LINC01465Q8N7H1 131 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 SLC4A11Q8NBS3 891 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 CCDC77Q9BR77 488 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 HAUS2Q9NVX0 235 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 ERAP1Q9NZ08 941 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 EVPLQ92817 2033 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 ATP2C2O75185 946 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 CDH16O75309 829 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 LRCH4O75427 683 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 MCF2P10911 925 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 PSMC1P62191 440 aaKnown RBP19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 ARHGAP1Q07960 439 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 GPS1Q13098 491 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 SNCBQ16143 134 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 TAZQ16635 292 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 CYB5D1Q6P9G0 228 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms