RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GTF2H1P32780 548 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 ALDH1A3P47895 512 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 EPHB3P54753 998 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 TNNC1P63316 161 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 ZNF699Q32M78 642 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 WDR72Q3MJ13 1102 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 HS6ST3Q8IZP7 471 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 TTC9BQ8N6N2 239 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 TRIML1Q8N9V2 468 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 TAF4BQ92750 862 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 ZNF512Q96ME7 567 aaPredicted RBP18.56■□□□□ 0.56
USP39-208ENST00000455732 MMS19Q96T76 1030 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 PRRX2Q99811 253 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 LRRC3Q9BY71 257 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 TMLHEQ9NVH6 421 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 CDH9Q9ULB4 789 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 SLC27A5Q9Y2P5 690 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 PCDHB5Q9Y5E4 795 aa18.56■□□□□ 0.56
USP39-208ENST00000455732 ZNF197O14709 1029 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 MOSPD3O75425 235 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 HAPLN1P10915 354 aaPredicted RBP18.55■□□□□ 0.56
USP39-208ENST00000455732 CD44P16070 742 aaKnown RBP18.55■□□□□ 0.56
USP39-208ENST00000455732 NPR3P17342 541 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
USP39-208ENST00000455732 PTPN5P54829 565 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 FAM171BQ6P995 826 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
USP39-208ENST00000455732 PSMG2Q969U7 264 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 MCRS1Q96EZ8 462 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 ASAH2Q9NR71 780 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 SLC2A4RGQ9NR83 387 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 ABI2Q9NYB9 513 aaPredicted RBP18.55■□□□□ 0.56
USP39-208ENST00000455732 KIAA1468Q9P260 1216 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 PTPRDP23468 1912 aa18.55■□□□□ 0.56
USP39-208ENST00000455732 OBSL1O75147 1896 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 KRBA1A5PL33 1030 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 TRIM49BA6NDI0 452 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 PPP1R3GB7ZBB8 358 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 ASS1P00966 412 aaKnown RBP18.54■□□□□ 0.56
USP39-208ENST00000455732 CFHP08603 1231 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 TRIM49P0CI25 452 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 TRIM49CP0CI26 452 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 ATF6P18850 670 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 LMO2P25791 158 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 PPP3CAQ08209 521 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 SGSM1Q2NKQ1 1148 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 MGAT5BQ3V5L5 792 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 CFAP221Q4G0U5 840 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 ZNF667Q5HYK9 610 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 CYP4A22Q5TCH4 519 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 CWF19L1Q69YN2 538 aaKnown RBP18.54■□□□□ 0.56
USP39-208ENST00000455732 ISM2Q6H9L7 571 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 ITIH5Q86UX2 942 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 TMC8Q8IU68 726 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 PRSS33Q8NF86 280 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 EEF2KMTQ96G04 330 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 FUBP3Q96I24 572 aaKnown RBP eCLIP18.54■□□□□ 0.56
USP39-208ENST00000455732 SEPT5Q99719 369 aaPredicted RBP18.54■□□□□ 0.56
USP39-208ENST00000455732 SYT15Q9BQS2 421 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 MRPL45Q9BRJ2 306 aaKnown RBP18.54■□□□□ 0.56
USP39-208ENST00000455732 TMEM8AQ9HCN3 771 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 FBXL21Q9UKT6 434 aa18.54■□□□□ 0.56
USP39-208ENST00000455732 NUP210Q8TEM1 1887 aaPredicted RBP18.54■□□□□ 0.56
USP39-208ENST00000455732 GREB1Q4ZG55 1949 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 HCRTO43612 131 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 SOAT2O75908 522 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 HLA-DRAP01903 254 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 P4HA1P13674 534 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 PIK3CAP42336 1068 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 GCLMP48507 274 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 CLCN5P51795 746 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 MAPRE1Q15691 268 aaKnown RBP18.53■□□□□ 0.56
USP39-208ENST00000455732 ASTLQ6HA08 431 aaPredicted RBP18.53■□□□□ 0.56
USP39-208ENST00000455732 TTI2Q6NXR4 508 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 SIX5Q8N196 739 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 TMEM105Q8N8V8 129 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 GPR152Q8TDT2 470 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 CEP63Q96MT8 703 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 GBP4Q96PP9 640 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 KXD1Q9BQD3 176 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 SNX25Q9H3E2 840 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 MFSD1Q9H3U5 465 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 CLSTN2Q9H4D0 955 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 NXF1Q9UBU9 619 aaKnown RBP18.53■□□□□ 0.56
USP39-208ENST00000455732 GTF3C4Q9UKN8 822 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 MIA3Q5JRA6 1907 aa18.53■□□□□ 0.56
USP39-208ENST00000455732 ZNF638Q14966 1978 aaKnown RBP18.52■□□□□ 0.56
USP39-208ENST00000455732 BICDL2A1A5D9 508 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 MYBPHLA2RUH7 354 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 BIN1O00499 593 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 STX10O60499 249 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 FGF19O95750 216 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 MYL4P12829 197 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 GNL1P36915 607 aaPredicted RBP18.52■□□□□ 0.56
USP39-208ENST00000455732 MAGEA11P43364 429 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 GPC5P78333 572 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 VEPH1Q14D04 833 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 CAMK4Q16566 473 aa18.52■□□□□ 0.56
USP39-208ENST00000455732 KRT39Q6A163 491 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms