RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 UBXN2AP68543 259 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SP140Q13342 867 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PRR16Q569H4 304 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 LRRC8BQ6P9F7 803 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 CROCCP2Q86T23 111 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PPFIBP2Q8ND30 876 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 EXD1Q8NHP7 514 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 RPRD1AQ96P16 312 aaPredicted RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 REEP2Q9BRK0 252 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 MXD3Q9BW11 206 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SERHL2Q9H4I8 314 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 UVRAGQ9P2Y5 699 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 STOML1Q9UBI4 398 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 FAM187AA6NFU0 413 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 RNGTTO60942 597 aaKnown RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 UBOX5O94941 541 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 UNC5CO95185 931 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 EYA4O95677 639 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 GALK1P51570 392 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 IFI35P80217 286 aaPredicted RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 HYIQ5T013 277 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 KCTD1Q719H9 257 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 TMC7Q7Z402 723 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 JAMLQ86YT9 394 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 RELL1Q8IUW5 271 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SLFN12Q8IYM2 578 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 CHCHD4Q8N4Q1 142 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 LILRB4Q8NHJ6 448 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 RIN3Q8TB24 985 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SEC14L1Q92503 715 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 NXPE3Q969Y0 559 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SNED1Q8TER0 1413 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PLSCR1O15162 318 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 ZC3H11AO75152 810 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SOX5P35711 763 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 CBX5P45973 191 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 DHX34Q14147 1143 aaKnown RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 CLUL1Q15846 466 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 ARHGAP44Q17R89 818 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 OLFML2BQ68BL8 750 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 DUPD1Q68J44 220 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 GALNT6Q8NCL4 622 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 TBC1D16Q8TBP0 767 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 MGARPQ8TDB4 240 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 FBXO41Q8TF61 875 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 SLC35C1Q96A29 364 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PGM2Q96G03 612 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PALMDQ9NP74 551 aa10.13□□□□□ -0.79
LINC01940-201ENST00000455228 PPP1R1BQ9UD71 204 aaPredicted RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 AJAP1Q9UKB5 411 aaPredicted RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 RTCBQ9Y3I0 505 aaKnown RBP10.13□□□□□ -0.79
LINC01940-201ENST00000455228 C2orf81A6NN90 581 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 RASGRF2O14827 1237 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 ZBTB5O15062 677 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 TTLL1O95922 423 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 EGFRP00533 1210 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 NUDT17P0C025 328 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 TMEM253P0C7T8 217 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 COL6A1P12109 1028 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 HOXC13P31276 330 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 RFC4P35249 363 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 HOXD13P35453 343 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 SLC12A3P55017 1021 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 PSMC6P62333 389 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 ZNF543Q08ER8 600 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 DRAP1Q14919 205 aaPredicted RBP10.12□□□□□ -0.79
LINC01940-201ENST00000455228 STILQ15468 1287 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 MFSD14BQ5SR56 506 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 C6orf183Q5T699 404 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 CATSPER3Q86XQ3 398 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 VPS52Q8N1B4 723 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 UBL4BQ8N7F7 174 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 DDHD1Q8NEL9 900 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 NRG4Q8WWG1 115 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 SIRT5Q9NXA8 310 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 GGT7Q9UJ14 662 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 KCNQ2O43526 872 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 SNX3O60493 162 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 AGTP01019 485 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 AKR1B1P15121 316 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 FGFR4P22455 802 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 MMP13P45452 471 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 MAPK7Q13164 816 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 TNFAIP8L3Q5GJ75 292 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 CCDC105Q8IYK2 499 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 CHPT1Q8WUD6 406 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 INTS12Q96CB8 462 aaKnown RBP10.12□□□□□ -0.79
LINC01940-201ENST00000455228 C18orf8Q96DM3 657 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 FANCEQ9HB96 536 aa10.12□□□□□ -0.79
LINC01940-201ENST00000455228 KLHL42Q9P2K6 505 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms