RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SEPT1Q8WYJ6 367 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 SHC3Q92529 594 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 P3H4Q92791 437 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 UNKQ9C0B0 810 aaKnown RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 PCDHA3Q9Y5H8 950 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ITIH2P19823 946 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 GLRA2P23416 452 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 KCNJ2P63252 427 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 TFDP1Q14186 410 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 BTNL9Q6UXG8 535 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 STMN2Q93045 179 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDR1-240ENST00000454612 NINJ2Q9NZG7 142 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 IP6K2Q9UHH9 426 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 USP15Q9Y4E8 981 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 H0YCG3 227 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 AVILO75366 819 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 SUPT20HL2P0C7V6 817 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ZNF286BP0CG31 522 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ABCG1P45844 678 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 CCNHP51946 323 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 KDSRQ06136 332 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 PDE1CQ14123 709 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 SPARCL1Q14515 664 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 C15orf59Q2T9L4 293 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ACOT1Q86TX2 421 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 LRRC37BQ96QE4 947 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 PPARGC1AQ9UBK2 798 aaKnown RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 A0A087WZ62 844 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 A0A0A6YYK5 440 aaPredicted RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 A6NJR5 290 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 A8MUI8 341 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 SLC4A1P02730 911 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CYP2C8P10632 490 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 GZMAP12544 262 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 PHBP35232 272 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 BCAR1P56945 870 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 SKOR1P84550 965 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 GTF2BQ00403 316 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 HSDL1Q3SXM5 330 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 EEF1DP3Q658K8 133 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 DNAAF3Q8N9W5 541 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CCDC124Q96CT7 223 aaKnown RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 UBIAD1Q9Y5Z9 338 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CDH16O75309 829 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 TTC4O95801 387 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 LAMB3Q13751 1172 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 EFTUD2Q15029 972 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■■■■□ 22.5
DDR1-240ENST00000454612 SPRED3Q2MJR0 410 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 ATF7IP2Q5U623 682 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 LONP2Q86WA8 852 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CLMNQ96JQ2 1002 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 OSBPL1AQ9BXW6 950 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 FAM129AQ9BZQ8 928 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 I3L4J1 428 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 PROSCO94903 275 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 RARBP10826 455 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 PTPRAP18433 802 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 WNT7BP56706 349 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 TAF5Q15542 800 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 PDCD2Q16342 344 aaPredicted RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 BMT2Q1RMZ1 405 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
DDR1-240ENST00000454612 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
DDR1-240ENST00000454612 A0A1W2PPM1 405 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 CBX6O95503 412 aa11.71□□□□□ -0.53
DDR1-240ENST00000454612 F7P08709 466 aaPredicted RBP11.71□□□□□ -0.53
DDR1-240ENST00000454612 ARL4CP56559 192 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms