RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CSH2P0DML3 217 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GDI1P31150 447 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 VIPR2P41587 438 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 TNNC1P63316 161 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 UBXN2BQ14CS0 331 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 ANGPT1Q15389 498 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 MAPRE1Q15691 268 aaKnown RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GPR158Q5T848 1215 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 SCARA3Q6AZY7 606 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 TPRG1Q6ZUI0 275 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GAREM2Q75VX8 874 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 OSTM1Q86WC4 334 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 SPATA2LQ8IUW3 424 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 ARID3BQ8IVW6 561 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 MFSD6LQ8IWD5 586 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 KIAA0895Q8NCT3 520 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 NELL2Q99435 816 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 PHOX2BQ99453 314 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 FOXQ1Q9C009 403 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 TASP1Q9H6P5 420 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 TMLHEQ9NVH6 421 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 ZMYM5Q9UJ78 669 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GTF3C4Q9UKN8 822 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 CDH9Q9ULB4 789 aa11.45□□□□□ -0.58
DDX39A-203ENST00000454233 MRPS17Q9Y2R5 130 aaKnown RBP11.45□□□□□ -0.58
DDX39A-203ENST00000454233 GOLGA6L4A6NEF3 574 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 FAM170BA6NMN3 283 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 PDXKO00764 312 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 NCAM2O15394 837 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 CALUO43852 315 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 CST3P01034 146 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 CYP2F1P24903 491 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 ATICP31939 592 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 AP3M2P53677 418 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 NUCB2P80303 420 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 BIRC3Q13489 604 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 STXBP5Q5T5C0 1151 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF852Q6ZMS4 543 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 C4orf50Q6ZRC1 276 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 LIMS2Q7Z4I7 341 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 SYAP1Q96A49 352 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 FUBP3Q96I24 572 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 PKMYT1Q99640 499 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 SYT15Q9BQS2 421 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 BCO2Q9BYV7 579 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 OSBPL6Q9BZF3 934 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 SNX25Q9H3E2 840 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 KCTD10Q9H3F6 313 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 LTB4R2Q9NPC1 389 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 TRPV5Q9NQA5 729 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 HEBP1Q9NRV9 189 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 DMAC2Q9NW81 257 aa11.44□□□□□ -0.58
DDX39A-203ENST00000454233 UXTQ9UBK9 157 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 MAGED2Q9UNF1 606 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-203ENST00000454233 MAN2B1O00754 1011 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 RHOBTB3O94955 611 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF202O95125 648 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
DDX39A-203ENST00000454233 NR3C1P04150 777 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 PDGFRBP09619 1106 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 FAM163BP0C2L3 166 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 CD72P21854 359 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 GNL1P36915 607 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-203ENST00000454233 MAGEA9P43362 315 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 CYP4F8P98187 520 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 DPYDQ12882 1025 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 DDR2Q16832 855 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 WDR72Q3MJ13 1102 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 OR6B3Q8NGW1 331 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 CSGALNACT1Q8TDX6 532 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 PARD3BQ8TEW8 1205 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 KBTBD7Q8WVZ9 684 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 MRPS31Q92665 395 aaKnown RBP11.43□□□□□ -0.58
DDX39A-203ENST00000454233 GOLPH3LQ9H4A5 285 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 IL21Q9HBE4 155 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 OBP2AQ9NY56 170 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 DLGAP2Q9P1A6 1054 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-203ENST00000454233 FRMD4BQ9Y2L6 1034 aa11.43□□□□□ -0.58
DDX39A-203ENST00000454233 MYBPHLA2RUH7 354 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 CHADO15335 359 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 HCRTO43612 131 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 ATP2C2O75185 946 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 TACC1O75410 805 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 GLULP15104 373 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 HMGA1P17096 107 aaKnown RBP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 LMO2P25791 158 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 DDX6P26196 483 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDX39A-203ENST00000454233 WEE1P30291 646 aa11.42□□□□□ -0.58
DDX39A-203ENST00000454233 AVPR1AP37288 418 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms