RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 LCMT1Q9UIC8 334 aa22.6■■□□□ 1.21
CTU2-202ENST00000453996 CYB561D2O14569 222 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 H2AFXP16104 143 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 HSPA6P17066 643 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 WARSP23381 471 aaKnown RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 MARCKSL1P49006 195 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 CLCNKBP51801 687 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 GSCP56915 257 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 GRIK3Q13003 919 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 PDCLQ13371 301 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 PPP1R26Q5T8A7 1209 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 CCDC70Q6NSX1 233 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 PDCL2Q8N4E4 241 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 UBA3Q8TBC4 463 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 DPEP3Q9H4B8 488 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 FAM49BQ9NUQ9 324 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 ARGLU1Q9NWB6 273 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 RNF216Q9NWF9 866 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 WDR35Q9P2L0 1181 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 CACNG4Q9UBN1 327 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 TTC7AQ9ULT0 858 aaPredicted RBP22.59■■□□□ 1.21
CTU2-202ENST00000453996 PCDHA3Q9Y5H8 950 aa22.59■■□□□ 1.21
CTU2-202ENST00000453996 GJB6O95452 261 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 FAM163BP0C2L3 166 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 PEX5P50542 639 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 PPP1R15BQ5SWA1 713 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 ARHGAP17Q68EM7 881 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 SLC24A5Q71RS6 500 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 CRYBG2Q8N1P7 616 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 RNPC3Q96LT9 517 aaKnown RBP22.58■■□□□ 1.21
CTU2-202ENST00000453996 MCEEQ96PE7 176 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 FTHL17Q9BXU8 183 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 IP6K2Q9UHH9 426 aa22.58■■□□□ 1.21
CTU2-202ENST00000453996 TMEM191CA6NGB0 347 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 CASTOR2A6NHX0 329 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 C9IYK1 514 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 POMCP01189 267 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 PDGFRBP09619 1106 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 MAN1A1P33908 653 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 PSMC1P62191 440 aaKnown RBP22.58■■□□□ 1.2
CTU2-202ENST00000453996 CLUL1Q15846 466 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 DCUN1D2Q6PH85 259 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 IPO4Q8TEX9 1081 aaKnown RBP22.58■■□□□ 1.2
CTU2-202ENST00000453996 HESX1Q9UBX0 185 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 INPP5FQ9Y2H2 1132 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 CEP350Q5VT06 3117 aa22.58■■□□□ 1.2
CTU2-202ENST00000453996 TANC1Q9C0D5 1861 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 INPPL1O15357 1258 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 HCRTO43612 131 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 EOMESO95936 686 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 ERBB2P04626 1255 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 LMO2P25791 158 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 GABRB2P47870 512 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 RPL7AP62424 266 aaKnown RBP22.57■■□□□ 1.2
CTU2-202ENST00000453996 UPP1Q16831 310 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 RTN4RL1Q86UN2 441 aaPredicted RBP22.57■■□□□ 1.2
CTU2-202ENST00000453996 XYLT1Q86Y38 959 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 LINC01599Q8WXQ3 324 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 TNIP3Q96KP6 325 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 SENP8Q96LD8 212 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 NAP1L3Q99457 506 aaPredicted RBP22.57■■□□□ 1.2
CTU2-202ENST00000453996 TJP2Q9UDY2 1190 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 TMEM59LQ9UK28 342 aa22.57■■□□□ 1.2
CTU2-202ENST00000453996 TARSL2A2RTX5 802 aaKnown RBP22.56■■□□□ 1.2
CTU2-202ENST00000453996 PITPNM1O00562 1244 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 TUBBP07437 444 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 SETSIPP0DME0 302 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 ZNF211Q13398 564 aaPredicted RBP22.56■■□□□ 1.2
CTU2-202ENST00000453996 ZNF268Q14587 947 aaPredicted RBP22.56■■□□□ 1.2
CTU2-202ENST00000453996 PKDCCQ504Y2 493 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 DDX27Q96GQ7 796 aaKnown RBP22.56■■□□□ 1.2
CTU2-202ENST00000453996 PNKPQ96T60 521 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 MIS12Q9H081 205 aa22.56■■□□□ 1.2
CTU2-202ENST00000453996 GOLGA8SH3BPF8 625 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 PQBP1O60828 265 aaKnown RBP22.55■■□□□ 1.2
CTU2-202ENST00000453996 FGGP02679 453 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 PFKMP08237 780 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 RWDD2BP57060 319 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 TUSC3Q13454 348 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 SEL1L2Q5TEA6 688 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 OSTM1Q86WC4 334 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 TTC30AQ86WT1 665 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 TMEM86AQ8N2M4 240 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 C3orf58Q8NDZ4 430 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 UROC1Q96N76 676 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 RAB21Q9UL25 225 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.55■■□□□ 1.2
CTU2-202ENST00000453996 SIGLEC16A6NMB1 481 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 IGFBP6P24592 240 aaPredicted RBP22.55■■□□□ 1.2
CTU2-202ENST00000453996 WSCD1Q658N2 575 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 C8orf74Q6P047 294 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 GLB1LQ6UWU2 654 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 DSTYKQ6XUX3 929 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 PAAF1Q9BRP4 392 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 ST7Q9NRC1 585 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 TSC2P49815 1807 aa22.55■■□□□ 1.2
CTU2-202ENST00000453996 KRIT1O00522 736 aa22.54■■□□□ 1.2
CTU2-202ENST00000453996 NBNO60934 754 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms