RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TLR10Q9BXR5 811 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 RNF19AQ9NV58 838 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 TFR2Q9UP52 801 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 PCDHB4Q9Y5E5 795 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 DUSP10Q9Y6W6 482 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 BRCA2P51587 3418 aa16.83■□□□□ 0.28
SNX17-204ENST00000453453 PIRO00625 290 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 NR1D1P20393 614 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 ANXA13P27216 316 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 RPL9P32969 192 aaKnown RBP16.82■□□□□ 0.28
SNX17-204ENST00000453453 TAF6P49848 677 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 MNAT1P51948 309 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 BPIFB4P59827 614 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 CYP27A1Q02318 531 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 SCARA5Q6ZMJ2 495 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 IRF2BP2Q7Z5L9 587 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 GPIHBP1Q8IV16 184 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 UROC1Q96N76 676 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 FAM124BQ9H5Z6 455 aaPredicted RBP16.82■□□□□ 0.28
SNX17-204ENST00000453453 CYP3A43Q9HB55 503 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 ALPK3Q96L96 1907 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 SCN1AP35498 2009 aa16.82■□□□□ 0.28
SNX17-204ENST00000453453 BTNL10A8MVZ5 291 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 CHUKO15111 745 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 KIF1CO43896 1103 aaKnown RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 EFCAB14O75071 495 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 FAM107AO95990 144 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 POMCP01189 267 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 ASPAP45381 313 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 PDCLQ13371 301 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 NOMO2Q5JPE7 1267 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 NAA35Q5VZE5 725 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 HGSNATQ68CP4 663 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 GSTCDQ8NEC7 633 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 DDX27Q96GQ7 796 aaKnown RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 HTATIP2Q9BUP3 242 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 MIOSQ9NXC5 875 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 POLIQ9UNA4 740 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 CAPN7Q9Y6W3 813 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 TTC3P53804 2025 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 PDE6CP51160 858 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 RNASELQ05823 741 aaKnown RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 ACTN3Q08043 901 aaPredicted RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 TUSC3Q13454 348 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 LTBP2Q14767 1821 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 SCARA3Q6AZY7 606 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 TMEM130Q8N3G9 435 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 ZNF473Q8WTR7 871 aaKnown RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 FAM193BQ96PV7 902 aaPredicted RBP16.81■□□□□ 0.28
SNX17-204ENST00000453453 DNAI2Q9GZS0 605 aa16.81■□□□□ 0.28
SNX17-204ENST00000453453 GOLGA6L7A0A1B0GV03 622 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
SNX17-204ENST00000453453 H0YHG0 523 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 PPEF2O14830 753 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 CYP26A1O43174 497 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
SNX17-204ENST00000453453 CSF2RAP15509 400 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 CD58P19256 250 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 PAX3P23760 479 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 PTK2Q05397 1052 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 CUL1Q13616 776 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 NAB2Q15742 525 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 TCTN1Q2MV58 587 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 CLLU1OSQ5K130 101 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 COL13A1Q5TAT6 717 aaPredicted RBP16.8■□□□□ 0.28
SNX17-204ENST00000453453 TMEM270Q6UE05 265 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 MAGEC3Q8TD91 643 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNX17-204ENST00000453453 CISHQ9NSE2 258 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
SNX17-204ENST00000453453 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 SNX9Q9Y5X1 595 aa16.8■□□□□ 0.28
SNX17-204ENST00000453453 GOLGA6L10A6NI86 522 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 PODXLO00592 558 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 HEXIM1O94992 359 aaKnown RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 WEE2P0C1S8 567 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 FGFR1P11362 822 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 AFF1P51825 1210 aaKnown RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 PPIGQ13427 754 aaKnown RBP eCLIP16.79■□□□□ 0.281e-6■■■□□ 14.9
SNX17-204ENST00000453453 C10orf76Q5T2E6 689 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 FBXW10Q5XX13 1052 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 C6orf89Q6UWU4 347 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 NLRP14Q86W24 1093 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 RBBP8NLQ8NC74 664 aaPredicted RBP16.79■□□□□ 0.28
SNX17-204ENST00000453453 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
SNX17-204ENST00000453453 LRRC45Q96CN5 670 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms