RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 KIAA1586Q9HCI6 787 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 CASS4Q9NQ75 786 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 DTNAQ9Y4J8 743 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 LINC00854A0A1B0GVQ3 168 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 NCF1BA6NI72 391 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 NCF1CA8MVU1 366 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 NCF1P14598 390 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 PHKA2P46019 1235 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 SGO1Q5FBB7 561 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ZBTB46Q86UZ6 589 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 LRRC6Q86X45 466 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 TEX9Q8N6V9 391 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 LNX1Q8TBB1 728 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 DEFB129Q9H1M3 183 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 SSTR1P30872 391 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 SFNP31947 248 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 SH3BGRP55822 239 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 VPS72Q15906 364 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 IMPG1Q17R60 797 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 MIIPQ5JXC2 388 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 GIPC2Q8TF65 315 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 MAGEB18Q96M61 343 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 CAMSAP1Q5T5Y3 1602 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 COL3A1P02461 1466 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 SPTLC1O15269 473 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ANXA13P27216 316 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 PAPOLAP51003 745 aaKnown RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 MXD4Q14582 209 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 DUOXA2Q1HG44 320 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ACCSLQ4AC99 568 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 ATP13A4Q4VNC1 1196 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
RIF1-206ENST00000453091 SPOCD1Q6ZMY3 1216 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 TRAPPC12Q8WVT3 735 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 FGFBP2Q9BYJ0 223 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 NYAP2Q9P242 653 aa8.09□□□□□ -1.11
RIF1-206ENST00000453091 PEX1O43933 1283 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 ZMPSTE24O75844 475 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 VTNP04004 478 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 SNRPAP09012 282 aaKnown RBP8.09□□□□□ -1.12
RIF1-206ENST00000453091 TPI1P60174 286 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.12
RIF1-206ENST00000453091 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 CBWD6Q4V339 395 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 CBWD3Q5JTY5 395 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 CBWD5Q5RIA9 395 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 PPIL6Q8IXY8 311 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 EXOC8Q8IYI6 725 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 L3MBTL3Q96JM7 780 aaPredicted RBP8.09□□□□□ -1.12
RIF1-206ENST00000453091 SERPINB12Q96P63 405 aa8.09□□□□□ -1.12
RIF1-206ENST00000453091 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.12
RIF1-206ENST00000453091 GPR75-ASB3A0A0A6YYF3 556 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 EEF2KO00418 725 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 PJA2O43164 708 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ITGB3P05106 788 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 TPH1P17752 444 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CLCN3P51790 818 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CACNA2D1P54289 1103 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CENPPQ6IPU0 288 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 PPP1R2P3Q6NXS1 205 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 BBS5Q8N3I7 341 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 DAGLBQ8NCG7 672 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 BEST2Q8NFU1 509 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 VPS50Q96JG6 964 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 MTMR12Q9C0I1 747 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 TMEM8AQ9HCN3 771 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 DDX28Q9NUL7 540 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 MTO1Q9Y2Z2 717 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 SAC3D1A6NKF1 404 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ANKRD63C9JTQ0 380 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 KDM1AO60341 852 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ESRRBO95718 433 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ITIH4Q14624 930 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 STRIP1Q5VSL9 837 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CERKQ8TCT0 537 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ACTRT1Q8TDG2 376 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 RMDN1Q96DB5 314 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 DACH2Q96NX9 599 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 SP110Q9HB58 689 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 PFDN6O15212 129 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 XPAP23025 273 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 ARHGDIAP52565 204 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ORC2Q13416 577 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ZNF786Q8N393 782 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 GLIS2Q9BZE0 524 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 ASAP2O43150 1006 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 GPD1P21695 349 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ZBTB17Q13105 803 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 C16orf46Q6P387 395 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 SYN2Q92777 582 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms