RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ING5Q8WYH8 240 aa17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 DHTKD1Q96HY7 919 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 CDH9Q9ULB4 789 aa17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 PCDHB5Q9Y5E4 795 aa17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
SCAMP4-205ENST00000452128 TRIM49P0CI25 452 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 TRIM49CP0CI26 452 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 CCNE1P24864 410 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 CYP2F1P24903 491 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 GTF2H1P32780 548 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 MAGEA11P43364 429 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 GPR15P49685 360 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 FKBP3Q00688 224 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 TRPC3Q13507 836 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 IQCEQ6IPM2 695 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 ST13P5Q8NFI4 369 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 MCRS1Q96EZ8 462 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 FUBP3Q96I24 572 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 MED15Q96RN5 788 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 LPIN3Q9BQK8 851 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 PLA2G2FQ9BZM2 168 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 APOBEC3GQ9HC16 384 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 SLC2A4RGQ9NR83 387 aa17.24■□□□□ 0.35
SCAMP4-205ENST00000452128 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 CETN3O15182 167 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 PDGFBP01127 241 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 HLA-DRAP01903 254 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 GJA1P17302 382 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 GCLMP48507 274 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 CDH8P55286 799 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 MGAT5BQ3V5L5 792 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 CYP4A22Q5TCH4 519 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 TANGO2Q6ICL3 276 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 PDZD4Q76G19 769 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 ELMOD1Q8N336 334 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 TAF4BQ92750 862 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 SEMA4DQ92854 862 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 ASB16Q96NS5 453 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 MMS19Q96T76 1030 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 SMYD3Q9H7B4 428 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 TMEM30AQ9NV96 361 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 ABI2Q9NYB9 513 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-205ENST00000452128 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 PHACTR2O75167 634 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 ECI2O75521 394 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 F11P03951 625 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 SRFP11831 508 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 NPR3P17342 541 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 WEE1P30291 646 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 ASPAP45381 313 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 BIRC3Q13489 604 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 TEAD2Q15562 447 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 ZNF699Q32M78 642 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 PAQR9Q6ZVX9 377 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 MYRFLQ96LU7 910 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 SEPT5Q99719 369 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 BCO2Q9BYV7 579 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 NXF1Q9UBU9 619 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
SCAMP4-205ENST00000452128 NCANO14594 1321 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 NOL4O94818 638 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 MYL4P12829 197 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 COL9A1P20849 921 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 TNNC1P63316 161 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 GPC5P78333 572 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 DDR2Q16832 855 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 IER5LQ5T953 404 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 SDHAF4Q5VUM1 108 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 MTSS1LQ765P7 747 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 ITIH5Q86UX2 942 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 CRYBG2Q8N1P7 616 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 GPR152Q8TDT2 470 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 GIPC2Q8TF65 315 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 PBXIP1Q96AQ6 731 aa17.21■□□□□ 0.35
SCAMP4-205ENST00000452128 ELSPBP1Q96BH3 223 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms