RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 ARID3BQ8IVW6 561 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 CEP57L1Q8IYX8 460 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 MAML2Q8IZL2 1156 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-208ENST00000452047 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 CLDN23Q96B33 292 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 ABCB6Q9NP58 842 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 HPSEQ9Y251 543 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
CPSF4-208ENST00000452047 PRAMEF12O95522 483 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CMA1P23946 247 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 WEE1P30291 646 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CDC25CP30307 473 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 LHX1P48742 406 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 GPR15P49685 360 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CYP2J2P51589 502 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CYP4F8P98187 520 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 MYL7Q01449 175 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 FZD5Q13467 585 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 PSMD6Q15008 389 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 KNOP1Q1ED39 458 aaKnown RBP13.39□□□□□ -0.27
CPSF4-208ENST00000452047 GPR158Q5T848 1215 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 TRAPPC11Q7Z392 1133 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 RDH13Q8NBN7 331 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 KIAA0895Q8NCT3 520 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 FAM200AQ8TCP9 573 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 GIPC2Q8TF65 315 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 KBTBD7Q8WVZ9 684 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 PAGE5Q96GU1 130 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 HPDLQ96IR7 371 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 LRRC3BQ96PB8 259 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 NELL2Q99435 816 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CGRRF1Q99675 332 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 TASP1Q9H6P5 420 aa13.39□□□□□ -0.27
CPSF4-208ENST00000452047 CGNQ9P2M7 1197 aaKnown RBP13.39□□□□□ -0.27
CPSF4-208ENST00000452047 FAM237AA0A1B0GTK4 181 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 A0A1B0GVL5 298 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 ZNF263O14978 683 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 SP9P0CG40 484 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 DLATP10515 647 aaKnown RBP13.38□□□□□ -0.27
CPSF4-208ENST00000452047 CYP2F1P24903 491 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 PCSK1P29120 753 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 MAGEA9P43362 315 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
CPSF4-208ENST00000452047 KRT85P78386 507 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 STK4Q13043 487 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 CFAP221Q4G0U5 840 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 ARHGAP15Q53QZ3 475 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 FAM171BQ6P995 826 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 NKD2Q969F2 451 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-208ENST00000452047 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 OBP2AQ9NY56 170 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 PIAS3Q9Y6X2 628 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 ANAPC1Q9H1A4 1944 aa13.38□□□□□ -0.27
CPSF4-208ENST00000452047 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
CPSF4-208ENST00000452047 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 MAN2B1O00754 1011 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 CHADO15335 359 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 PRPF40AO75400 957 aaKnown RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 F11P03951 625 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 TNNI1P19237 187 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 LMO2P25791 158 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 MLLT6P55198 1093 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 NLRP12P59046 1061 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 SDHAF4Q5VUM1 108 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 FUBP3Q96I24 572 aaKnown RBP eCLIP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 SLC46A2Q9BY10 475 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 SPATA6Q9NWH7 488 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 USP25Q9UHP3 1055 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
CPSF4-208ENST00000452047 R4GN57 208 aa13.37□□□□□ -0.27
CPSF4-208ENST00000452047 PTPRZ1P23471 2315 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-208ENST00000452047 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 NCAM2O15394 837 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 ATP2C2O75185 946 aa13.36□□□□□ -0.27
CPSF4-208ENST00000452047 TADA3O75528 432 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms