RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 PSMD6Q15008 389 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 NFE2Q16621 373 aaPredicted RBP16.91■□□□□ 0.3
TTC38-205ENST00000451998 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
TTC38-205ENST00000451998 SOWAHAQ2M3V2 549 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 ZNF852Q6ZMS4 543 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 FSIP1Q8NA03 581 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 DEPDC1BQ8WUY9 529 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 IRF7Q92985 503 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 SYT15Q9BQS2 421 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 HSFX1Q9UBD0 423 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 PIAS3Q9Y6X2 628 aa16.91■□□□□ 0.3
TTC38-205ENST00000451998 ATP2C2O75185 946 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 PRAMEF12O95522 483 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 PDGFRBP09619 1106 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 PCSK1P29120 753 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 LHX1P48742 406 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 CASP4P49662 377 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 NDUFA8P51970 172 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 TNNC1P63316 161 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 STK4Q13043 487 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 TRPC3Q13507 836 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 GDAP2Q9NXN4 497 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 MRPS17Q9Y2R5 130 aaKnown RBP16.9■□□□□ 0.3
TTC38-205ENST00000451998 ATP6V1DQ9Y5K8 247 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 R4GN57 208 aa16.9■□□□□ 0.3
TTC38-205ENST00000451998 WDFY4Q6ZS81 3184 aa16.89■□□□□ 0.3
TTC38-205ENST00000451998 MYBPHLA2RUH7 354 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 SLC38A8A6NNN8 435 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 KLRC4O43908 158 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 SOX9P48436 509 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.29
TTC38-205ENST00000451998 BMT2Q1RMZ1 405 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 C1orf210Q8IVY1 113 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 MFSD6LQ8IWD5 586 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 NKD2Q969F2 451 aaPredicted RBP16.89■□□□□ 0.29
TTC38-205ENST00000451998 MYLPFQ96A32 169 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 TASP1Q9H6P5 420 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 TRPC7Q9HCX4 862 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 DLGAP2Q9P1A6 1054 aa16.89■□□□□ 0.29
TTC38-205ENST00000451998 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
TTC38-205ENST00000451998 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 LMO2P25791 158 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 NBL1P41271 181 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 MYL6P60660 151 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 SNRPFP62306 86 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 RPL10AP62906 217 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 SCARA5Q6ZMJ2 495 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 MAB21L3Q8N8X9 362 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 KBTBD7Q8WVZ9 684 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 E2F7Q96AV8 911 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 GOLPH3LQ9H4A5 285 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 TRPV4Q9HBA0 871 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 USP25Q9UHP3 1055 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 ZFHX2Q9C0A1 2572 aaPredicted RBP16.88■□□□□ 0.29
TTC38-205ENST00000451998 TCHHQ07283 1943 aa16.88■□□□□ 0.29
TTC38-205ENST00000451998 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 CST3P01034 146 aaPredicted RBP16.87■□□□□ 0.29
TTC38-205ENST00000451998 CSH1P0DML2 217 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 CSH2P0DML3 217 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 CCNE1P24864 410 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 AVPR1AP37288 418 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 NLRP12P59046 1061 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 CSTF1Q05048 431 aaKnown RBP16.87■□□□□ 0.29
TTC38-205ENST00000451998 BECN1Q14457 450 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 WDR72Q3MJ13 1102 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 MDH1BQ5I0G3 518 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 TXNDC8Q6A555 127 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 C4orf50Q6ZRC1 276 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 FAM3CQ92520 227 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 MRPS31Q92665 395 aaKnown RBP16.87■□□□□ 0.29
TTC38-205ENST00000451998 SCAND2PQ9GZW5 306 aaPredicted RBP16.87■□□□□ 0.29
TTC38-205ENST00000451998 CRTAC1Q9NQ79 661 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
TTC38-205ENST00000451998 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 HPSEQ9Y251 543 aa16.87■□□□□ 0.29
TTC38-205ENST00000451998 MAN2B1O00754 1011 aa16.86■□□□□ 0.29
TTC38-205ENST00000451998 GABRDO14764 452 aa16.86■□□□□ 0.29
TTC38-205ENST00000451998 NCAM2O15394 837 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms