RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 NFE2Q16621 373 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 DDR2Q16832 855 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 SLC44A4Q53GD3 710 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 C1orf220Q5T0J3 134 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 TDRD10Q5VZ19 366 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 TMEM150AQ86TG1 271 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 GUF1Q8N442 669 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 STKLD1Q8NE28 680 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 LRRC3BQ96PB8 259 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 ATXN3LQ9H3M9 355 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 TSC2P49815 1807 aa13.23□□□□□ -0.29
CSNK1E-211ENST00000451964 SHISA7A6NL88 538 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 STK25O00506 426 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 TACC1O75410 805 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 AKAP3O75969 853 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 VNN1O95497 513 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 STAU1O95793 577 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 PCSK1P29120 753 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 NUBP1P53384 320 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 STARD6P59095 220 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 TRPC3Q13507 836 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 ZCWPW2Q504Y3 356 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 VITQ6UXI7 678 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 ERCC4Q92889 916 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 CCDC47Q96A33 483 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 SYT15Q9BQS2 421 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 GPR88Q9GZN0 384 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
CSNK1E-211ENST00000451964 GOLGA6L4A6NEF3 574 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 H0Y858 1186 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 CALUO43852 315 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 PHACTR2O75167 634 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 LRRN2O75325 713 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 KIF20AO95235 890 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 F11P03951 625 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 NR2F2P24468 414 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 ATICP31939 592 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 GNL1P36915 607 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 PTPN5P54829 565 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 CYP4F8P98187 520 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 BIRC3Q13489 604 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 VEPH1Q14D04 833 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 NFIL3Q16649 462 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 CFAP221Q4G0U5 840 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 GPR158Q5T848 1215 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 MYLPFQ96A32 169 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 PRRX2Q99811 253 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 TRMT61BQ9BVS5 477 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 SLC46A2Q9BY10 475 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 SLITRK6Q9H5Y7 841 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 VRTNQ9H8Y1 702 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 DLGAP2Q9P1A6 1054 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 CDH9Q9ULB4 789 aa13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-211ENST00000451964 HEPACAM2A8MVW5 462 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 FGF19O95750 216 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 DCNP07585 359 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 GLULP15104 373 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 PSMC3P17980 439 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 CD72P21854 359 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 AP3M2P53677 418 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 CDH8P55286 799 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 NLRP12P59046 1061 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 RPL10AP62906 217 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 TNNC1P63316 161 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 PFKPQ01813 784 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 ADAM9Q13443 819 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 NCOA4Q13772 614 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 MLF2Q15773 248 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 TAF12Q16514 161 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 ZACNQ401N2 412 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 MFSD6LQ8IWD5 586 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 OR6B3Q8NGW1 331 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SPATA20Q8TB22 786 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
CSNK1E-211ENST00000451964 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms