RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KRBA2Q6ZNG9 492 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 GAREM2Q75VX8 874 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 TMEM86AQ8N2M4 240 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 LEMD2Q8NC56 503 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 PJA1Q8NG27 643 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 KBTBD7Q8WVZ9 684 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 SMARCD2Q92925 531 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 MMRN2Q9H8L6 949 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■■■ 149.1
USP54-207ENST00000451492 GDAP2Q9NXN4 497 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 NXF1Q9UBU9 619 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
USP54-207ENST00000451492 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
USP54-207ENST00000451492 MYBPHLA2RUH7 354 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 GOLGA6L4A6NEF3 574 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 HEPACAM2A8MVW5 462 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 DPYSL4O14531 572 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ZNF202O95125 648 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 PRAMEF12O95522 483 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 NR3C1P04150 777 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 LMO2P25791 158 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 RAP1GAPP47736 663 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 LHX1P48742 406 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 MYL6P60660 151 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 DLG4P78352 724 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 PFKPQ01813 784 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 CYP27A1Q02318 531 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 DPYDQ12882 1025 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 PSMD2Q13200 908 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 PNOCQ13519 176 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ANGPT1Q15389 498 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 WDR72Q3MJ13 1102 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 MDH1BQ5I0G3 518 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 TDRD10Q5VZ19 366 aaKnown RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 YAF2Q8IY57 180 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 CCDC105Q8IYK2 499 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 OR6B3Q8NGW1 331 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 GOLGA5Q8TBA6 731 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ERCC4Q92889 916 aaPredicted RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 MYLPFQ96A32 169 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 RSPRY1Q96DX4 576 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ZFYVE19Q96K21 471 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 ACBD6Q9BR61 282 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 MRPL45Q9BRJ2 306 aaKnown RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 TRMT61BQ9BVS5 477 aaKnown RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 KCTD10Q9H3F6 313 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 CGNQ9P2M7 1197 aaKnown RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 SIT1Q9Y3P8 196 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
USP54-207ENST00000451492 ASB3Q9Y575 518 aa10.37□□□□□ -0.75
USP54-207ENST00000451492 A0A1W2PQ27 194 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 A0A1W2PQ64 194 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 A0A1W2PQD8 194 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 KANSL1LA0AUZ9 987 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 ZNF263O14978 683 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 CALUO43852 315 aaPredicted RBP10.36□□□□□ -0.75
USP54-207ENST00000451492 MICAL2O94851 1124 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 GLULP15104 373 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 PSMC3P17980 439 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 PCSK1P29120 753 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 CDC25CP30307 473 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 SNRPFP62306 86 aaKnown RBP10.36□□□□□ -0.75
USP54-207ENST00000451492 SMARCB1Q12824 385 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 IFRD2Q12894 506 aaPredicted RBP10.36□□□□□ -0.75
USP54-207ENST00000451492 NFE2Q16621 373 aaPredicted RBP10.36□□□□□ -0.75
USP54-207ENST00000451492 ZNF699Q32M78 642 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 ARID3BQ8IVW6 561 aaPredicted RBP10.36□□□□□ -0.75
USP54-207ENST00000451492 C12orf56Q8IXR9 622 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 SHDQ96IW2 340 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 MKNK1Q9BUB5 465 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 SMYD3Q9H7B4 428 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 CRTAC1Q9NQ79 661 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 HSFX1Q9UBD0 423 aa10.36□□□□□ -0.75
USP54-207ENST00000451492 FAM237AA0A1B0GTK4 181 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 FAM170BA6NMN3 283 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 A8MXQ7 604 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 PDXKO00764 312 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 GABRDO14764 452 aa10.35□□□□□ -0.75
USP54-207ENST00000451492 RHOBTB3O94955 611 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms