RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OSBPL6Q9BZF3 934 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
CHD3-205ENST00000449744 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
CHD3-205ENST00000449744 MAN2B1O00754 1011 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 KLRC4O43908 158 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 LRRN2O75325 713 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 MYL1P05976 194 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 CD72P21854 359 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 NBL1P41271 181 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 RPL10AP62906 217 aaKnown RBP16.38■□□□□ 0.21
CHD3-205ENST00000449744 TRPC3Q13507 836 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 SPATA2LQ8IUW3 424 aaPredicted RBP16.38■□□□□ 0.21
CHD3-205ENST00000449744 ARID3BQ8IVW6 561 aaPredicted RBP16.38■□□□□ 0.21
CHD3-205ENST00000449744 CSGALNACT1Q8TDX6 532 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
CHD3-205ENST00000449744 MMS19Q96T76 1030 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 TASP1Q9H6P5 420 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 DLGAP2Q9P1A6 1054 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
CHD3-205ENST00000449744 PROB1E7EW31 1015 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 GABRDO14764 452 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 PHACTR2O75167 634 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 CSH1P0DML2 217 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 CSH2P0DML3 217 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 MAGEA9P43362 315 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 CYP4F8P98187 520 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 STK4Q13043 487 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 BECN1Q14457 450 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 C1orf210Q8IVY1 113 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 SYT15Q9BQS2 421 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 TRPV5Q9NQA5 729 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 SPATA6Q9NWH7 488 aaPredicted RBP16.37■□□□□ 0.21
CHD3-205ENST00000449744 ZMYM5Q9UJ78 669 aa16.37■□□□□ 0.21
CHD3-205ENST00000449744 MAGED2Q9UNF1 606 aaPredicted RBP16.37■□□□□ 0.21
CHD3-205ENST00000449744 MTF2Q9Y483 593 aaPredicted RBP16.37■□□□□ 0.21
CHD3-205ENST00000449744 CLSTN1O94985 981 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 CST3P01034 146 aaPredicted RBP16.36■□□□□ 0.21
CHD3-205ENST00000449744 RPN1P04843 607 aaKnown RBP16.36■□□□□ 0.21
CHD3-205ENST00000449744 GLULP15104 373 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 CYP2F1P24903 491 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 TARSP26639 723 aaKnown RBP16.36■□□□□ 0.21
CHD3-205ENST00000449744 GPR15P49685 360 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 NDUFA8P51970 172 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 TNNC1P63316 161 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 MAPRE1Q15691 268 aaKnown RBP16.36■□□□□ 0.21
CHD3-205ENST00000449744 DDR2Q16832 855 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 SDHAF4Q5VUM1 108 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 C4orf50Q6ZRC1 276 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 KIAA0895Q8NCT3 520 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
CHD3-205ENST00000449744 MKNK1Q9BUB5 465 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 SNX25Q9H3E2 840 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 IL21Q9HBE4 155 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 OBP2AQ9NY56 170 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 CDH9Q9ULB4 789 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 PIAS3Q9Y6X2 628 aa16.36■□□□□ 0.21
CHD3-205ENST00000449744 ZFHX2Q9C0A1 2572 aaPredicted RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 MIA3Q5JRA6 1907 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 COL4A3Q01955 1670 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 MYBPHLA2RUH7 354 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 CHADO15335 359 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 HCRTO43612 131 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 KIF20AO95235 890 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 WARSP23381 471 aaKnown RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 BIRC3Q13489 604 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 WDR72Q3MJ13 1102 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 CFAP221Q4G0U5 840 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 SCN4BQ8IWT1 228 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 KBTBD7Q8WVZ9 684 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 FAM3CQ92520 227 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 MRPS31Q92665 395 aaKnown RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 RSPRY1Q96DX4 576 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 FUBP3Q96I24 572 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHD3-205ENST00000449744 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 MAGEC2Q9UBF1 373 aaPredicted RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 UXTQ9UBK9 157 aaPredicted RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 NDRG2Q9UN36 371 aaKnown RBP16.35■□□□□ 0.21
CHD3-205ENST00000449744 NCANO14594 1321 aa16.35■□□□□ 0.21
CHD3-205ENST00000449744 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 A0A1W2PQ27 194 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 A0A1W2PQ64 194 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 A0A1W2PQD8 194 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 SLC38A8A6NNN8 435 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 PDXKO00764 312 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 HMGA1P17096 107 aaKnown RBP16.34■□□□□ 0.21
CHD3-205ENST00000449744 LMO2P25791 158 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHD3-205ENST00000449744 WEE1P30291 646 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 AVPR1AP37288 418 aa16.34■□□□□ 0.21
CHD3-205ENST00000449744 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms