RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 LHX1P48742 406 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 CDR1P51861 262 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 RPL10AP62906 217 aaKnown RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 MTAPQ13126 283 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 DUOXA2Q1HG44 320 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 EPM2AIP1Q7L775 607 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 CBWD2Q8IUF1 395 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 WDR49Q8IV35 697 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 ADGRF2Q8IZF7 708 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 BPIFB1Q8TDL5 484 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 NELL1Q92832 810 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 HPS3Q969F9 1004 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 FAM84AQ96KN4 292 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 PI4K2AQ9BTU6 479 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 FAM126AQ9BYI3 521 aaPredicted RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 LMAN1LQ9HAT1 526 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 TMLHEQ9NVH6 421 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 THG1LQ9NWX6 298 aaKnown RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 ZSCAN32Q9NX65 697 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 FAM13BQ9NYF5 915 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 TCHHQ07283 1943 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 SLC38A8A6NNN8 435 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 GABRDO14764 452 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 HMGA1P17096 107 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 ACAT1P24752 427 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 NLRP12P59046 1061 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 LRRC32Q14392 662 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 PPP2R5DQ14738 602 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 CFAP221Q4G0U5 840 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 HS2ST1Q7LGA3 356 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 OSTM1Q86WC4 334 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 SPATA2LQ8IUW3 424 aaPredicted RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 SUMF1Q8NBK3 374 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 ZBTB44Q8NCP5 570 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 OR5B17Q8NGF7 314 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 RUBCNQ92622 972 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 FUBP3Q96I24 572 aaKnown RBP eCLIP11.6□□□□□ -0.55
SRRT-205ENST00000449389 HPDLQ96IR7 371 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 PKMYT1Q99640 499 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 HINFPQ9BQA5 517 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 SLC46A2Q9BY10 475 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 AGPAT3Q9NRZ7 376 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
SRRT-205ENST00000449389 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 PCDHA7Q9UN72 937 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 FANCMQ8IYD8 2048 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
SRRT-205ENST00000449389 TICRRQ7Z2Z1 1910 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 MYBPHLA2RUH7 354 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 LILRB5O75023 590 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 F11P03951 625 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 CHRNB1P11230 501 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 CTHP32929 405 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 AVPR1AP37288 418 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 GPR15P49685 360 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 CCR3P51677 355 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 EHHADHQ08426 723 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 SOWAHAQ2M3V2 549 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 SCARA3Q6AZY7 606 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 C4orf50Q6ZRC1 276 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 LIMS2Q7Z4I7 341 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 TMEM150AQ86TG1 271 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 XXYLT1Q8NBI6 393 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 SCFD1Q8WVM8 642 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 TRMT2BQ96GJ1 504 aaKnown RBP11.59□□□□□ -0.55
SRRT-205ENST00000449389 ZFYVE19Q96K21 471 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 KIF9Q9HAQ2 790 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
SRRT-205ENST00000449389 GTF3C4Q9UKN8 822 aa11.59□□□□□ -0.55
SRRT-205ENST00000449389 MAGED2Q9UNF1 606 aaPredicted RBP11.59□□□□□ -0.55
SRRT-205ENST00000449389 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
SRRT-205ENST00000449389 NOL4O94818 638 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms