RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 SGK1O00141 431 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 TJP3O95049 919 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 CD48P09326 243 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 HARSP12081 509 aaKnown RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 CALB2P22676 271 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 TUBP50607 506 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 RAD23BP54727 409 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 NR1H3Q13133 447 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 BLMHQ13867 455 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 KCNT1Q5JUK3 1230 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 CDCA2Q69YH5 1023 aaPredicted RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 AGGF1Q8N302 714 aaeCLIP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 FBXO41Q8TF61 875 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 STK32AQ8WU08 396 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 TFAP2BQ92481 460 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 INPP5DQ92835 1189 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 SPDL1Q96EA4 605 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 RAB3IPQ96QF0 476 aaPredicted RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 FBXO40Q9UH90 709 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 SIP14410 1827 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 EGFRP00533 1210 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 RTP1P59025 263 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 ACTR2P61160 394 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 SP2Q02086 613 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 ENPEPQ07075 957 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 MTMR2Q13614 643 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 EMC2Q15006 297 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 CLNKQ7Z7G1 428 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 IGDCC3Q8IVU1 814 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 TCP10LQ8TDR4 215 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
POLR1B-209ENST00000448770 PAFAH2Q99487 392 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 PCDH9Q9HC56 1237 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 SHOC2Q9UQ13 582 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 ADGRA2Q96PE1 1338 aa14.38□□□□□ -0.11
POLR1B-209ENST00000448770 PARP14Q460N5 1801 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ITGAVP06756 1048 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 LINGO3P0C6S8 592 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
POLR1B-209ENST00000448770 NCOA4Q13772 614 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ANO7Q6IWH7 933 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 POTEAQ6S8J7 498 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ABHD15Q6UXT9 468 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 JOSD2Q8TAC2 188 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 DCAKDQ8WVC6 231 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 NUDCD1Q96RS6 583 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 CGRRF1Q99675 332 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 RPAP3Q9H6T3 665 aaPredicted RBP14.37□□□□□ -0.11
POLR1B-209ENST00000448770 BATF3Q9NR55 127 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ARL8BQ9NVJ2 186 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 DRG1Q9Y295 367 aaKnown RBP14.37□□□□□ -0.11
POLR1B-209ENST00000448770 WNT10BO00744 389 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 C2CD2LO14523 706 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 DCTN3O75935 186 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 FSTL1Q12841 308 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 HIF1AQ16665 826 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 TFDP3Q5H9I0 405 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 DNAJC24Q6P3W2 148 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 DSTYKQ6XUX3 929 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 CENPUQ71F23 418 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 LRRC6Q86X45 466 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 NAT8LQ8N9F0 302 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 RDM1Q8NG50 284 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 MICAL1Q8TDZ2 1067 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 ATP6V0A1Q93050 837 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 SLC24A2Q9UI40 661 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
POLR1B-209ENST00000448770 COL11A1P12107 1806 aaPredicted RBP14.37□□□□□ -0.11
POLR1B-209ENST00000448770 A0A0B4J269 797 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 LRRIQ4A6NIV6 560 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 VWA5AO00534 786 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 TRAFD1O14545 582 aaPredicted RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 ZBED4O75132 1171 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 RPL22P35268 128 aaKnown RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 HIRAP54198 1017 aaPredicted RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 GEMIN4P57678 1058 aaKnown RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 SLC25A11Q02978 314 aaKnown RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 LMNB2Q03252 620 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 MCL1Q07820 350 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 TAF5Q15542 800 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 RHPN2Q8IUC4 686 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 ENDOVQ8N8Q3 282 aaKnown RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 FBXO36Q8NEA4 188 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 TEPSINQ96N21 525 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 MSTO1Q9BUK6 570 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 CADM1Q9BY67 442 aaKnown RBP14.36□□□□□ -0.11
POLR1B-209ENST00000448770 TLE6Q9H808 572 aa14.36□□□□□ -0.11
POLR1B-209ENST00000448770 ZWILCHQ9H900 591 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms