RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 KATNAL2Q8IYT4 538 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 C18orf8Q96DM3 657 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 ACBD3Q9H3P7 528 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 PCYOX1Q9UHG3 505 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 FAM153AQ9UHL3 310 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 MTUS1Q9ULD2 1270 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 USTQ9Y2C2 406 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 GRIN2DO15399 1336 aa18.73■□□□□ 0.59
LMNA-208ENST00000448611 XPOTO43592 962 aaKnown RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 CHRNA1P02708 482 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 ERBB2P04626 1255 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 ATF7P17544 494 aaPredicted RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 OAS2P29728 719 aaKnown RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 AARSP49588 968 aaKnown RBP eCLIP18.72■□□□□ 0.59
LMNA-208ENST00000448611 SOX4Q06945 474 aaPredicted RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 MGAT3Q09327 533 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 PDCLQ13371 301 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 TTC27Q6P3X3 843 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
LMNA-208ENST00000448611 XYLT1Q86Y38 959 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 NIPA2Q8N8Q9 360 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 C12orf50Q8NA57 414 aaPredicted RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 MAGOHBQ96A72 148 aaKnown RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 WDR35Q9P2L0 1181 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 ST3GAL5Q9UNP4 418 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 NME7Q9Y5B8 376 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 FAM187AA6NFU0 413 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 SIGLEC16A6NMB1 481 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 RPS6KA5O75582 802 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 PTGIRP43119 386 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 GABRB2P47870 512 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 GPS2Q13227 327 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 PIGHQ14442 188 aaPredicted RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 KCTD19Q17RG1 926 aaPredicted RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 SOWAHAQ2M3V2 549 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 FBXO47Q5MNV8 452 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 TRIM51Q9BSJ1 452 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 SRRDQ9UH36 339 aa18.72■□□□□ 0.59
LMNA-208ENST00000448611 UTP11Q9Y3A2 253 aaKnown RBP18.72■□□□□ 0.59
LMNA-208ENST00000448611 F8VP50 259 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 DAPK3O43293 454 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 CTSHP09668 335 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 KRT3P12035 628 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 TCF4P15884 667 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 PSMC1P62191 440 aaKnown RBP18.71■□□□□ 0.59
LMNA-208ENST00000448611 ZNF268Q14587 947 aaPredicted RBP18.71■□□□□ 0.59
LMNA-208ENST00000448611 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 JAMLQ86YT9 394 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 TSEN2Q8NCE0 465 aaKnown RBP18.71■□□□□ 0.59
LMNA-208ENST00000448611 UBA3Q8TBC4 463 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 HERPUD2Q9BSE4 406 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 TSPAN16Q9UKR8 245 aa18.71■□□□□ 0.59
LMNA-208ENST00000448611 PTGESO14684 152 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 SPTLC1O15269 473 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 RPLP2P05387 115 aaKnown RBP18.7■□□□□ 0.58
LMNA-208ENST00000448611 PFKMP08237 780 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 HOXD10P28358 340 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 RFC1P35251 1148 aaPredicted RBP18.7■□□□□ 0.58
LMNA-208ENST00000448611 PNPLA4P41247 253 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 ARHGEF6Q15052 776 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 STILQ15468 1287 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 LRRC38Q5VT99 294 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 CCDC137Q6PK04 289 aaKnown RBP18.7■□□□□ 0.58
LMNA-208ENST00000448611 DPH6Q7L8W6 267 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 UNC93AQ86WB7 457 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 MREGQ8N565 214 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 C12orf29Q8N999 325 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 EXD1Q8NHP7 514 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 JOSD2Q8TAC2 188 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 MCRS1Q96EZ8 462 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 ZNF560Q96MR9 790 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 RAB17Q9H0T7 212 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 NEUROG2Q9H2A3 272 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 LRRC19Q9H756 370 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 CHST12Q9NRB3 414 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 GDAP2Q9NXN4 497 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 KPNA7A9QM74 516 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 COILP38432 576 aaPredicted RBP18.7■□□□□ 0.58
LMNA-208ENST00000448611 SSR1P43307 286 aaKnown RBP18.7■□□□□ 0.58
LMNA-208ENST00000448611 LLGL1Q15334 1064 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 DUPD1Q68J44 220 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 LIMS2Q7Z4I7 341 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 ACOT1Q86TX2 421 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 FNIP1Q8TF40 1166 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 KBTBD7Q8WVZ9 684 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 ZBTB9Q96C00 473 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 ERP44Q9BS26 406 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 GOLGA2P5Q9HBQ8 144 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 FAM114A2Q9NRY5 505 aa18.7■□□□□ 0.58
LMNA-208ENST00000448611 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
LMNA-208ENST00000448611 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
LMNA-208ENST00000448611 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
LMNA-208ENST00000448611 FNTAP49354 379 aa18.69■□□□□ 0.58
LMNA-208ENST00000448611 NFX1Q12986 1120 aaKnown RBP18.69■□□□□ 0.58
LMNA-208ENST00000448611 KLF1Q13351 362 aaPredicted RBP18.69■□□□□ 0.58
LMNA-208ENST00000448611 HLTFQ14527 1009 aaKnown RBP eCLIP18.69■□□□□ 0.58
LMNA-208ENST00000448611 GOLGA7BQ2TAP0 167 aa18.69■□□□□ 0.58
LMNA-208ENST00000448611 PKDCCQ504Y2 493 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms