RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	AFAP1L1	Q8TED9	768 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	U2AF1L4	Q8WU68	220 aa	Known RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	RFFL	Q8WZ73	363 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	ATP6V0A1	Q93050	837 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	GAL3ST3	Q96A11	431 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	LRRC45	Q96CN5	670 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	INPP4A	Q96PE3	977 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	DIRC2	Q96SL1	478 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	FIZ1	Q96SL8	496 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	RMDN3	Q96TC7	470 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	MIPEP	Q99797	713 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	SENP7	Q9BQF6	1050 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	2e-7	■■■□□ 18.7
PTPN12-208	ENST00000447995	PDCD2L	Q9BRP1	358 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	LRRC1	Q9BTT6	524 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	SLITRK6	Q9H5Y7	841 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	NSUN3	Q9H649	340 aa	Known RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	PXMP2	Q9NR77	195 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	RBM12	Q9NTZ6	932 aa	Known RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	FBXO28	Q9NVF7	368 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	RAPGEFL1	Q9UHV5	662 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	AMFR	Q9UKV5	643 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	PPM1H	Q9ULR3	514 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	NENF	Q9UMX5	172 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	FAN1	Q9Y2M0	1017 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	ZHX2	Q9Y6X8	837 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	ZNF536	O15090	1300 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	MYPN	Q86TC9	1320 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	LTBP3	Q9NS15	1303 aa		4.36	□□□□□ -1.71
PTPN12-208	ENST00000447995	PRAMEF27	A3QJZ7	478 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ANKRD62	A6NC57	917 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GOLGA6C	A6NDK9	693 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ERICH4	A6NGS2	130 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GOLGA6L10	A6NI86	522 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	TMCO5B	A8MYB1	307 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	FAM155A	B1AL88	458 aa	Predicted RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DDX39A	O00148	427 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	VWA5A	O00534	786 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DDX3X	O00571	662 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	CEP104	O60308	925 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	RPS6KA5	O75582	802 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ERLIN2	O94905	339 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GGPS1	O95749	300 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	CELA3A	P09093	270 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GOLGA6D	P0CG33	693 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	TRIM49	P0CI25	452 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	TRIM49C	P0CI26	452 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	MED14OS	P0DP75	135 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	MYCL	P12524	364 aa	Predicted RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GZMA	P12544	262 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	CAPN2	P17655	700 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	VCAM1	P19320	739 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GSTT1	P30711	240 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	CXCR5	P32302	372 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GBP1	P32455	592 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ACTN2	P35609	894 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	MXI1	P50539	228 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GALC	P54803	685 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	HADHB	P55084	474 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	NCKAP1L	P55160	1127 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	RPS6	P62753	249 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	MRPS9	P82933	396 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	GUCY2D	Q02846	1103 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DMP1	Q13316	513 aa	Predicted RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ITGB3BP	Q13352	177 aa	Predicted RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	INPP5A	Q14642	412 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	TCEAL1	Q15170	157 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	NKG7	Q16617	165 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	NBPF9	Q3BBW0	867 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	EPC2	Q52LR7	807 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	XKR9	Q5GH70	373 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	SFRP5	Q5T4F7	317 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	CFAP58	Q5T655	872 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	FAM102B	Q5T8I3	360 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	SCARA3	Q6AZY7	606 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	C11orf63	Q6NUN7	778 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	PPP1R2P3	Q6NXS1	205 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	NSMF	Q6X4W1	530 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ENOSF1	Q7L5Y1	443 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	HAUS6	Q7Z4H7	955 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	MAATS1	Q7Z4T9	603 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	THAP5	Q7Z6K1	395 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	SLFN11	Q7Z7L1	901 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DAAM2	Q86T65	1068 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DAW1	Q8N136	415 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	RASGEF1C	Q8N431	466 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	C1orf131	Q8NDD1	294 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	IL31RA	Q8NI17	732 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	SLC30A5	Q8TAD4	765 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	FAM76A	Q8TAV0	307 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	DHX38	Q92620	1227 aa	Known RBP	4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	ELMO3	Q96BJ8	720 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	PLPPR2	Q96GM1	343 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	IFT74	Q96LB3	600 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	C12orf42	Q96LP6	360 aa		4.35	□□□□□ -1.71
PTPN12-208	ENST00000447995	TEPSIN	Q96N21	525 aa		4.35	□□□□□ -1.71

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