RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TULP1O00294 542 aaPredicted RBP26.28■■□□□ 1.8
PMS1-214ENST00000446877 PRPF40AO75400 957 aaKnown RBP26.28■■□□□ 1.8
PMS1-214ENST00000446877 HMGA1P17096 107 aaKnown RBP26.28■■□□□ 1.8
PMS1-214ENST00000446877 PMLP29590 882 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 MPLP40238 635 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 GALK1P51570 392 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 FBXO43Q4G163 708 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 TXNDC8Q6A555 127 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 TMEM150AQ86TG1 271 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 MON1AQ86VX9 555 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 P2RY13Q9BPV8 354 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 CCSER1Q9C0I3 900 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 CFAP47Q6ZTR5 3102 aa26.28■■□□□ 1.8
PMS1-214ENST00000446877 CSH1P0DML2 217 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 CSH2P0DML3 217 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 ARSAP15289 507 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 POU5F1Q01860 360 aaKnown RBP26.27■■□□□ 1.8
PMS1-214ENST00000446877 MCM6Q14566 821 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 ELF2Q15723 593 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 NFE2Q16621 373 aaPredicted RBP26.27■■□□□ 1.8
PMS1-214ENST00000446877 PLA2G2CQ5R387 149 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 RALGAPA1Q6GYQ0 2036 aa26.27■■□□□ 1.8
PMS1-214ENST00000446877 USP24Q9UPU5 2620 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 RNF43Q68DV7 783 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 CPA6Q8N4T0 437 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 ZNF560Q96MR9 790 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 HHIPQ96QV1 700 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 PI4K2AQ9BTU6 479 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 SMOC1Q9H4F8 434 aa26.26■■□□□ 1.79
PMS1-214ENST00000446877 FBRSL1Q9HCM7 1045 aaKnown RBP26.26■■□□□ 1.79
PMS1-214ENST00000446877 RHOBTB1O94844 696 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 PNPLA4P41247 253 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 RPL10AP62906 217 aaKnown RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 SHC2P98077 582 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 ZNF268Q14587 947 aaPredicted RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 KARSQ15046 597 aaKnown RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 PLK5Q496M5 336 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 ZC2HC1CQ53FD0 456 aaPredicted RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 TTC16Q8NEE8 873 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 POMGNT1Q8WZA1 660 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 RAD54LQ92698 747 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 CHFRQ96EP1 664 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 LSM14BQ9BX40 385 aaKnown RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 BLOC1S4Q9NUP1 217 aa26.25■■□□□ 1.79
PMS1-214ENST00000446877 POLR3BQ9NW08 1133 aaPredicted RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 UXTQ9UBK9 157 aaPredicted RBP26.25■■□□□ 1.79
PMS1-214ENST00000446877 CHD6Q8TD26 2715 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 NUP210Q8TEM1 1887 aaPredicted RBP26.24■■□□□ 1.79
PMS1-214ENST00000446877 TISP43B9A030 160 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 IL18RAPO95256 599 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 APBB3O95704 486 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 PLCG1P19174 1290 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 GJA4P35212 333 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 POSTNQ15063 836 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 NT5DC4Q86YG4 428 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 KRI1Q8N9T8 703 aaKnown RBP26.24■■□□□ 1.79
PMS1-214ENST00000446877 FIZ1Q96SL8 496 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 KIF2CQ99661 725 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 ECT2Q9H8V3 914 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 TRPC7Q9HCX4 862 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 TMLHEQ9NVH6 421 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 DUS2Q9NX74 493 aaKnown RBP26.24■■□□□ 1.79
PMS1-214ENST00000446877 STYXL1Q9Y6J8 313 aa26.24■■□□□ 1.79
PMS1-214ENST00000446877 KCNK5O95279 499 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 GPR15P49685 360 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 PSMD2Q13200 908 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 MTF1Q14872 753 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 SYT13Q7L8C5 426 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 RPLP0P6Q8NHW5 317 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 LRRC15Q8TF66 581 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 ACDQ96AP0 544 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 DUSP15Q9H1R2 295 aaPredicted RBP26.23■■□□□ 1.79
PMS1-214ENST00000446877 ST6GALNAC4Q9H4F1 302 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 MYH11P35749 1972 aa26.23■■□□□ 1.79
PMS1-214ENST00000446877 CEP295Q9C0D2 2601 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 LONP1P36776 959 aaKnown RBP26.22■■□□□ 1.79
PMS1-214ENST00000446877 IFNAR2P48551 515 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 CREB5Q02930 508 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 FAM160A1Q05DH4 1040 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 DDR2Q16832 855 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 SDHAF4Q5VUM1 108 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 EFCAB13Q8IY85 973 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 CCDC26Q8TAB7 109 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 CD101Q93033 1021 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 ATP2A3Q93084 1043 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 ACBD6Q9BR61 282 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 ABCB6Q9NP58 842 aa26.22■■□□□ 1.79
PMS1-214ENST00000446877 TRAV19A0A0A6YYK7 116 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 HUS1O60921 280 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 CKMP06732 381 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 USP17L7P0C7H9 530 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 TFAMQ00059 246 aaKnown RBP26.21■■□□□ 1.79
PMS1-214ENST00000446877 MYL7Q01449 175 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 NR1H3Q13133 447 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 DMC1Q14565 340 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 PDCL2Q8N4E4 241 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 STKLD1Q8NE28 680 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 RIN3Q8TB24 985 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 OSCP1Q8WVF1 389 aa26.21■■□□□ 1.79
PMS1-214ENST00000446877 LARP4BQ92615 738 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms