RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NSUN7Q8NE18 718 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 OR6B3Q8NGW1 331 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 HAS1Q92839 578 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 NMD3Q96D46 503 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 SUCLG2Q96I99 432 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 TRIB1Q96RU8 372 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 SMOQ99835 787 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 ALOXE3Q9BYJ1 711 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 LRRC27Q9C0I9 530 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 VPS11Q9H270 941 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 NRDE2Q9H7Z3 1164 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 GALNT9Q9HCQ5 603 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 SLC2A4RGQ9NR83 387 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 MAP3K20Q9NYL2 800 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 CPNE7Q9UBL6 633 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF69Q9UC07 566 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 RGS17Q9UGC6 210 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 TRIM43BA6NCK2 446 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 DCLK1O15075 740 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 MGEA5O60502 916 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 PQBP1O60828 265 aaKnown RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 ERN1O75460 977 aaKnown RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 GRPP07492 148 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 VIPR2P41587 438 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 TM4SF4P48230 202 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SLC11A2P49281 568 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SUMO3P55854 103 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 FMO1Q01740 532 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 DYRK1AQ13627 763 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 CNGA2Q16280 664 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZXDCQ2QGD7 858 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 TIGD2Q4W5G0 525 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SP5Q6BEB4 398 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 TAF2Q6P1X5 1199 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF783Q6ZMS7 281 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 CLNKQ7Z7G1 428 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SESTD1Q86VW0 696 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 TEX19Q8NA77 164 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 PSD4Q8NDX1 1056 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 FAM46DQ8NEK8 389 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 POF1BQ8WVV4 589 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 TRIM43Q96BQ3 446 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 RNF31Q96EP0 1072 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 MSLNLQ96KJ4 702 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 MLST8Q9BVC4 326 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SELENOOQ9BVL4 669 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SRRDQ9UH36 339 aa5.36□□□□□ -1.55
HMGB1P48-201ENST00000446155 SPATA31A3Q5VYP0 1347 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 BTN3A1O00481 513 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 RPL17P18621 184 aaKnown RBP5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 UCP3P55916 312 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 CTBP1Q13363 440 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 TP53BP2Q13625 1128 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 GGNQ86UU5 652 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 ADGRG5Q8IZF4 528 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 PCSK9Q8NBP7 692 aaKnown RBP5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 PHKBQ93100 1093 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 SGCZQ96LD1 299 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 CCDC138Q96M89 665 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 APOL5Q9BWW9 433 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 SMOC2Q9H3U7 446 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 COL20A1Q9P218 1284 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 FNIP2Q9P278 1114 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 MTO1Q9Y2Z2 717 aaKnown RBP5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 NOX1Q9Y5S8 564 aa5.35□□□□□ -1.55
HMGB1P48-201ENST00000446155 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 UNC119BA6NIH7 251 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 EGR2P11161 476 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 MAN1A1P33908 653 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 PIK3CBP42338 1070 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF134P52741 427 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 WNT3P56703 355 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 RPS7P62081 194 aaKnown RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 GUCY1B3Q02153 619 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 SLC13A2Q13183 592 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 BIRC3Q13489 604 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 PUM1Q14671 1186 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 HLXQ14774 488 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 SPDYE7PQ495Y7 208 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 Q6ZPA2 131 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 GPR149Q86SP6 731 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 SYNE4Q8N205 404 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 FAM109AQ8N4B1 249 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 NKAPQ8N5F7 415 aaKnown RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 ASB10Q8WXI3 467 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 HEPHQ9BQS7 1158 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 MESP1Q9BRJ9 268 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF518BQ9C0D4 1074 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 TMX4Q9H1E5 349 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZHX3Q9H4I2 956 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 MMRN2Q9H8L6 949 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 AS3MTQ9HBK9 375 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 KIAA1586Q9HCI6 787 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 TRMT13Q9NUP7 481 aaKnown RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 XPR1Q9UBH6 696 aa5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 AFF4Q9UHB7 1163 aaKnown RBP5.34□□□□□ -1.55
HMGB1P48-201ENST00000446155 PAXBP1Q9Y5B6 917 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms