RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 SUMO3P55854 103 aaPredicted RBP4.87□□□□□ -1.63
LINC01004-201ENST00000445184 FOXF2Q12947 444 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 TRIM14Q14142 442 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 PUM3Q15397 648 aaKnown RBP4.87□□□□□ -1.63
LINC01004-201ENST00000445184 CCDC174Q6PII3 467 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 PCGF5Q86SE9 256 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 LCORLQ8N3X6 602 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 ZNF366Q8N895 744 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 ATP11CQ8NB49 1132 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 BRIX1Q8TDN6 353 aaKnown RBP4.87□□□□□ -1.63
LINC01004-201ENST00000445184 GCC1Q96CN9 775 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 MYEOVQ96EZ4 313 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 TBATAQ96M53 351 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 TMEM8AQ9HCN3 771 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 IL23AQ9NPF7 189 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 RLIMQ9NVW2 624 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 AFF4Q9UHB7 1163 aaKnown RBP4.87□□□□□ -1.63
LINC01004-201ENST00000445184 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 PCDHGB2Q9Y5G2 931 aa4.87□□□□□ -1.63
LINC01004-201ENST00000445184 RBM8AQ9Y5S9 174 aaKnown RBP4.87□□□□□ -1.63
LINC01004-201ENST00000445184 APOL1O14791 398 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 ITGA10O75578 1167 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SCAF4O95104 1147 aaKnown RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 HARSP12081 509 aaKnown RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 GYPEP15421 78 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 HOXB6P17509 224 aaKnown RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 PTH2RP49190 550 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 ICA1Q05084 483 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 TCF15Q12870 199 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 BLMHQ13867 455 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SIM2Q14190 667 aaPredicted RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 KIF22Q14807 665 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 TANGO2Q6ICL3 276 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 CATSPERGQ6ZRH7 1159 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 NME8Q8N427 588 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 FAM98AQ8NCA5 519 aaKnown RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 PLA2G15Q8NCC3 412 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SIMC1Q8NDZ2 872 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 NAP1L4Q99733 375 aaKnown RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SLC29A3Q9BZD2 475 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 TERF2IPQ9NYB0 399 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 PDP2Q9P2J9 529 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 AJAP1Q9UKB5 411 aaPredicted RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 OGDHLQ9ULD0 1010 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 SNX13Q9Y5W8 968 aa4.86□□□□□ -1.63
LINC01004-201ENST00000445184 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
LINC01004-201ENST00000445184 A0A087WWL8 130 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 DNAJC9-AS1A6NH13 148 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PRRT4C9JH25 899 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 M0R3H8 397 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 SYT5O00445 386 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 AREL1O15033 823 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 NPC1O15118 1278 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 TRIM24O15164 1050 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 KCNQ3O43525 872 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 EEF1GP26641 437 aaKnown RBP4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PIK3CGP48736 1102 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 ALDH9A1P49189 494 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PPFIA1Q13136 1202 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 DCAF17Q5H9S7 520 aaPredicted RBP4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PRAMEF14Q5SWL7 426 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 CCDC70Q6NSX1 233 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PGBD2Q6P3X8 592 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 CYP26C1Q6V0L0 522 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 RSPH3Q86UC2 560 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 ZNF354CQ86Y25 554 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 VGLL2Q8N8G2 317 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 TEX19Q8NA77 164 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 FANCBQ8NB91 859 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 CCHCR1Q8TD31 782 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 CAVIN3Q969G5 261 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 SCLT1Q96NL6 688 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 UIMC1Q96RL1 719 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 MYLK2Q9H1R3 596 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 SARS2Q9NP81 518 aaKnown RBP4.85□□□□□ -1.63
LINC01004-201ENST00000445184 SYBUQ9NX95 663 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 ING3Q9NXR8 418 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 C9orf78Q9NZ63 289 aaPredicted RBP4.85□□□□□ -1.63
LINC01004-201ENST00000445184 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 PCDHA1Q9Y5I3 950 aa4.85□□□□□ -1.63
LINC01004-201ENST00000445184 TTBK1Q5TCY1 1321 aaPredicted RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 FFAR2O15552 330 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 TEX33O43247 280 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 DAPK3O43293 454 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 LPXNO60711 386 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 SLC43A1O75387 559 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 DNAJB5O75953 348 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 AHSGP02765 367 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 CD1AP06126 327 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 ANXA2P07355 339 aaKnown RBP4.84□□□□□ -1.63
LINC01004-201ENST00000445184 FAM163BP0C2L3 166 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 VSIG10L2P0DP72 767 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 IL2RBP14784 551 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 BRAFP15056 766 aa4.84□□□□□ -1.63
LINC01004-201ENST00000445184 HDCP19113 662 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms