RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CGRRF1Q99675 332 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 TRPV4Q9HBA0 871 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 ZFP14Q9HCL3 533 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 KANSL1LA0AUZ9 987 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 MYBPHLA2RUH7 354 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 HEPACAM2A8MVW5 462 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 HUS1O60921 280 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 TNNC2P02585 160 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 GDI1P31150 447 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 PSMC1P62191 440 aaKnown RBP11.67□□□□□ -0.54
SF3A1-203ENST00000444440 FZD5Q13467 585 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 DUOXA2Q1HG44 320 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 WDR44Q5JSH3 913 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 GPR158Q5T848 1215 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 TPRG1Q6ZUI0 275 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ARID3BQ8IVW6 561 aaPredicted RBP11.67□□□□□ -0.54
SF3A1-203ENST00000444440 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 TMEM86AQ8N2M4 240 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 TOP6BLQ8N6T0 577 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 RIN3Q8TB24 985 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
SF3A1-203ENST00000444440 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
SF3A1-203ENST00000444440 XYLT2Q9H1B5 865 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ATXN3LQ9H3M9 355 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 KIAA1586Q9HCI6 787 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 LTB4R2Q9NPC1 389 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 EXOC1Q9NV70 894 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 DMAC2Q9NW81 257 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 SIT1Q9Y3P8 196 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 ASB3Q9Y575 518 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
SF3A1-203ENST00000444440 DNAH14Q0VDD8 3507 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 RALGAPA1Q6GYQ0 2036 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 LRRIQ3A6PVS8 624 aaPredicted RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 F11P03951 625 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 RPN1P04843 607 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 PSMC3P17980 439 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 TNNI1P19237 187 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 RFX1P22670 979 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 NBL1P41271 181 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 SYKP43405 635 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 TUFMP49411 452 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 DLG4P78352 724 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 TSPY1Q01534 308 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 PRKCQQ04759 706 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 DPYDQ12882 1025 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 DDR2Q16832 855 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 FAM171BQ6P995 826 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 HS2ST1Q7LGA3 356 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 MFSD6LQ8IWD5 586 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 DCP1BQ8IZD4 617 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 FAM200AQ8TCP9 573 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 C2orf15Q8WU43 125 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 ZFYVE19Q96K21 471 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 TRMT61BQ9BVS5 477 aaKnown RBP11.66□□□□□ -0.54
SF3A1-203ENST00000444440 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
SF3A1-203ENST00000444440 ZFHX2Q9C0A1 2572 aaPredicted RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 PROB1E7EW31 1015 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 EXOC3O60645 756 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 VNN1O95497 513 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 PDGFRBP09619 1106 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 WARSP23381 471 aaKnown RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SOX9P48436 509 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 LHX1P48742 406 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 CACNA2D1P54289 1103 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 NLRP12P59046 1061 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 MYL6P60660 151 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 NUCB2P80303 420 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 MYL7Q01449 175 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 PFKPQ01813 784 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SURF1Q15526 300 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 C1orf220Q5T0J3 134 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 KRBA2Q6ZNG9 492 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 ITIH5Q86UX2 942 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 PARD3BQ8TEW8 1205 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 DNASE1L2Q92874 299 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 MYLPFQ96A32 169 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 FNBP1Q96RU3 617 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SYT15Q9BQS2 421 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SLC46A2Q9BY10 475 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
SF3A1-203ENST00000444440 MAGED2Q9UNF1 606 aaPredicted RBP11.65□□□□□ -0.54
SF3A1-203ENST00000444440 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms