RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 F11P03951 625 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 HMGA1P17096 107 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 HOXA6P31267 233 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 CTHP32929 405 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 AVPR1AP37288 418 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 AMPD2Q01433 879 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 INTS6LQ5JSJ4 861 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 CSGALNACT2Q8N6G5 542 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 IQUBQ8NA54 791 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 MRPS31Q92665 395 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 MYRFLQ96LU7 910 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 CBWD1Q9BRT8 395 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 SLC46A2Q9BY10 475 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 IKZF4Q9H2S9 585 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 DDX43Q9NXZ2 648 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 L1RE1Q9UN81 338 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 ANK1P16157 1881 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 SCN1AP35498 2009 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 A0A087X0B3 334 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 PRPF6O94906 941 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 FAM163BP0C2L3 166 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 NLRP12P59046 1061 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 ARHGAP8P85298 464 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 DUOXA2Q1HG44 320 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 ITPRIPL2Q3MIP1 535 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 MON1AQ86VX9 555 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 GIPC2Q8TF65 315 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 SNX21Q969T3 373 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 EXOC4Q96A65 974 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 LRRC3BQ96PB8 259 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 TRIM9Q9C026 710 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 INTS13Q9NVM9 706 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 RAB23Q9ULC3 237 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 SNX9Q9Y5X1 595 aa17.53■□□□□ 0.4
CTDSP1-204ENST00000443891 UBE4BO95155 1302 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 SLC38A8A6NNN8 435 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 CUTAO60888 179 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 NOL4O94818 638 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 TNNC2P02585 160 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 MAGEA11P43364 429 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 CYP4F8P98187 520 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 BFSP1Q12934 665 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 E2F4Q16254 413 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 ATL3Q6DD88 541 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 TSSK4Q6SA08 328 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 LIMS2Q7Z4I7 341 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 PDILTQ8N807 584 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 PKMYT1Q99640 499 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 FAM83CQ9BQN1 747 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 TDP1Q9NUW8 608 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 DLL3Q9NYJ7 618 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 CGNQ9P2M7 1197 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 GMEB2Q9UKD1 530 aa17.52■□□□□ 0.4
CTDSP1-204ENST00000443891 NUP210Q8TEM1 1887 aaPredicted RBP17.52■□□□□ 0.39
CTDSP1-204ENST00000443891 GOLGA8IPA6NC78 632 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 GOLGA8JA6NMD2 632 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 LRP3O75074 770 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 KRT19P08727 400 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 PFKLP17858 780 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 WNT7BP56706 349 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 LMNB2Q03252 620 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 CCINQ13939 588 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 LAIR1Q6GTX8 287 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 FAM171BQ6P995 826 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 TMEM150AQ86TG1 271 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 WDR49Q8IV35 697 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 ADGRF2Q8IZF7 708 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 ZSWIM2Q8NEG5 633 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 ZNF507Q8TCN5 953 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 RMDN1Q96DB5 314 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 C7orf25Q9BPX7 421 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 PI4K2AQ9BTU6 479 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 FGFBP2Q9BYJ0 223 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 MTMR12Q9C0I1 747 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 PCIF1Q9H4Z3 704 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 TMLHEQ9NVH6 421 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 GTSE1Q9NYZ3 720 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 EHD2Q9NZN4 543 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 SIX4Q9UIU6 781 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 TICRRQ7Z2Z1 1910 aa17.51■□□□□ 0.39
CTDSP1-204ENST00000443891 PDE6CP51160 858 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 RUNX3Q13761 415 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 GAS6Q14393 721 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 PDGFRLQ15198 375 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 VSTM1Q6UX27 236 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 EPM2AIP1Q7L775 607 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 DGLUCYQ7Z3D6 616 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms