RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 WEE1P30291 646 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 CXCL12P48061 93 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 LHX1P48742 406 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
TTC28-203ENST00000442232 DGKKQ5KSL6 1271 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 TSSK4Q6SA08 328 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 LRRTM3Q86VH5 581 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
TTC28-203ENST00000442232 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 IQUBQ8NA54 791 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 TTC8Q8TAM2 541 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
TTC28-203ENST00000442232 DHX58Q96C10 678 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 PDE11AQ9HCR9 933 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 ABCB6Q9NP58 842 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 GDAP2Q9NXN4 497 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 SNX9Q9Y5X1 595 aa12.65□□□□□ -0.38
TTC28-203ENST00000442232 MYBPHLA2RUH7 354 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 ARNTLO00327 626 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 EIF3DO15371 548 aaKnown RBP eCLIP12.64□□□□□ -0.39
TTC28-203ENST00000442232 YEATS4O95619 227 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 CTHP32929 405 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 SOX9P48436 509 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 AMPD2Q01433 879 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 FZD5Q13467 585 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 ITPRIPL2Q3MIP1 535 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
TTC28-203ENST00000442232 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
TTC28-203ENST00000442232 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
TTC28-203ENST00000442232 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 ZFYVE19Q96K21 471 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 TRIM9Q9C026 710 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
TTC28-203ENST00000442232 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
TTC28-203ENST00000442232 UBE4BO95155 1302 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 SHISA7A6NL88 538 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 CLSTN1O94985 981 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 CHRNB1P11230 501 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 SDHBP21912 280 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
TTC28-203ENST00000442232 WNT7BP56706 349 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 NLRP12P59046 1061 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 PON2Q15165 354 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 MAPRE1Q15691 268 aaKnown RBP12.63□□□□□ -0.39
TTC28-203ENST00000442232 FAM26FQ5R3K3 315 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 LMBRD2Q68DH5 695 aaPredicted RBP12.63□□□□□ -0.39
TTC28-203ENST00000442232 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 HS2ST1Q7LGA3 356 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 SCN4BQ8IWT1 228 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 NELL1Q92832 810 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
TTC28-203ENST00000442232 HPDLQ96IR7 371 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 SMG9Q9H0W8 520 aaKnown RBP12.63□□□□□ -0.39
TTC28-203ENST00000442232 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 TRPC7Q9HCX4 862 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 TMLHEQ9NVH6 421 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 INTS13Q9NVM9 706 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 KBTBD4Q9NVX7 518 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 HSPBP1Q9NZL4 362 aa12.63□□□□□ -0.39
TTC28-203ENST00000442232 LILRB5O75023 590 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 TNNI1P19237 187 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 CYP2F1P24903 491 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 ANXA13P27216 316 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 ME1P48163 572 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 GPR15P49685 360 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
TTC28-203ENST00000442232 E2F4Q16254 413 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 DDR2Q16832 855 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 PRR23BQ6ZRT6 265 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 DGLUCYQ7Z3D6 616 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
TTC28-203ENST00000442232 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
TTC28-203ENST00000442232 SYT15Q9BQS2 421 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms