RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 NDST1P52848 882 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 NOMO3P69849 1222 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CENPCQ03188 943 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TLE2Q04725 743 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TLDC1Q6P9B6 456 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ZNF598Q86UK7 904 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SLC4A11Q8NBS3 891 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM35BQ8NCS4 154 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SLC35G2Q8TBE7 412 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CPA5Q8WXQ8 436 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TFAP2BQ92481 460 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ZNF653Q96CK0 615 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ARHGEF26Q96DR7 871 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CABS1Q96KC9 395 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TWNKQ96RR1 684 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 NT5C1AQ9BXI3 368 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ELOVL4Q9GZR5 314 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MIOSQ9NXC5 875 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CTTNBP2NLQ9P2B4 639 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 KIAA1257Q9ULG3 409 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 FRMPD3Q5JV73 1810 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CITO14578 2027 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SPTLC1O15269 473 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 HUS1O60921 280 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 NBNO60934 754 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 AP1G2O75843 785 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 LSM8O95777 96 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ATP1A1P05023 1023 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CFHP08603 1231 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 GJA8P48165 433 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 LILRA4P59901 499 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ZRSR2Q15696 482 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 GLB1LQ6UWU2 654 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 RTN4RL1Q86UN2 441 aaPredicted RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MAB21L3Q8N8X9 362 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ANKLE1Q8NAG6 615 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 DBF4BQ8NFT6 615 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SEPT8Q92599 483 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 HMGXB4Q9UGU5 601 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 INPP5FQ9Y2H2 1132 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 PARNO95453 639 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 POMCP01189 267 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MYBL1P10243 752 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 VDRP11473 427 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 COL6A1P12109 1028 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SSTR3P32745 418 aaPredicted RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 FAM189BP81408 668 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ORC1Q13415 861 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SOWAHAQ2M3V2 549 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 TRIM60Q495X7 471 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 PLEKHG4Q58EX7 1191 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 C1orf53Q5VUE5 145 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 PAPD7Q5XG87 772 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 UNC93AQ86WB7 457 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MCOLN2Q8IZK6 566 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SYCE1Q8N0S2 351 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 OR6B3Q8NGW1 331 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 HEXIM2Q96MH2 286 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ZSWIM1Q9BR11 485 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MRPL45Q9BRJ2 306 aaKnown RBP8.56□□□□□ -1.04
CCDC39-201ENST00000442201 ZNF518BQ9C0D4 1074 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 OSGEPQ9NPF4 335 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 MRFAP1Q9Y605 127 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 SAR1BQ9Y6B6 198 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 RALGAPA2Q2PPJ7 1873 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 HSPA1AP0DMV8 641 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 HSPA1BP0DMV9 641 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 HADHBP55084 474 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 SLC8A3P57103 927 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 TCEAL1Q15170 157 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 SGO2Q562F6 1265 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 LIN9Q5TKA1 542 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 PHF13Q86YI8 300 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 SDR16C5Q8N3Y7 309 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 APBB2Q92870 758 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 VCPIP1Q96JH7 1222 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 ADAM22Q9P0K1 906 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CNOT8Q9UFF9 292 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 PODXLO00592 558 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 FTCDO95954 541 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CYP1A2P05177 515 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 FNTAP49354 379 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms