RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CCSER1Q9C0I3 900 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 UCK1Q9HA47 277 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 NUDT19A8MXV4 375 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CLN5O75503 358 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CCDC192P0DO97 292 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CD46P15529 392 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 PAMP19021 973 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 RANBP10Q6VN20 620 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-206ENST00000441438 C8orf4Q9NR00 106 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 FBXL21Q9UKT6 434 aa11.12□□□□□ -0.63
SYNE2-206ENST00000441438 LAG3P18627 525 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 HLA-DPA1P20036 260 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 CFL1P23528 166 aaKnown RBP11.11□□□□□ -0.63
SYNE2-206ENST00000441438 MAPK4P31152 587 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 MSH2P43246 934 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 PRIM2P49643 509 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 ARSDP51689 593 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 AFF1P51825 1210 aaKnown RBP11.11□□□□□ -0.63
SYNE2-206ENST00000441438 AUHQ13825 339 aaKnown RBP11.11□□□□□ -0.63
SYNE2-206ENST00000441438 NCF4Q15080 339 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 DPYSL2Q16555 572 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 FSCBQ5H9T9 825 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 CCDC121Q6ZUS5 278 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 ZMIZ2Q8NF64 920 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 PHOSPHO2Q8TCD6 241 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 IP6K1Q92551 441 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 STK33Q9BYT3 514 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 KLHL9Q9P2J3 617 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 LRRIQ3A6PVS8 624 aaPredicted RBP11.11□□□□□ -0.63
SYNE2-206ENST00000441438 H0YIV9 168 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 RFPL3O75679 317 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 RNF8O76064 485 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 SGPL1O95470 568 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 MC4RP32245 332 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 IL13P35225 146 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 FOXK2Q01167 660 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 CADM3Q8N126 398 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 SLC35G2Q8TBE7 412 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 SECISBP2Q96T21 854 aaKnown RBP11.11□□□□□ -0.63
SYNE2-206ENST00000441438 HGH1Q9BTY7 390 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 PACSIN1Q9BY11 444 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 IL37Q9NZH6 218 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 UBP1Q9NZI7 540 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 ERVK-19Q9WJR5 959 aa11.11□□□□□ -0.63
SYNE2-206ENST00000441438 E9PMD0 336 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 NEMP1O14524 444 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SURF6O75683 361 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 LRG1P02750 347 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 GCP02774 474 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 L1CAMP32004 1257 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 VBP1P61758 197 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 FOXO1Q12778 655 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 CSTF3Q12996 717 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 USH1GQ495M9 461 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 KANK2Q63ZY3 851 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PAPD4Q6PIY7 484 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 HUS1BQ8NHY5 278 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PIP4K2CQ8TBX8 421 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SPPL3Q8TCT6 385 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SLC5A11Q8WWX8 675 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PIP5K1AQ99755 562 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 BACH1O14867 736 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 TP73O15350 636 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 ERAL1O75616 437 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SLU7O95391 586 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 NRG1Q02297 640 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 FOXB2Q5VYV0 432 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 NANOS1Q8WY41 292 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 RXFP3Q9NSD7 469 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 NINJ2Q9NZG7 142 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 RPS6KA6Q9UK32 745 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 RNF112Q9ULX5 631 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms