RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DLG4P78352 724 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 HTR4Q13639 388 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 SLC5A9Q2M3M2 681 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 CFAP221Q4G0U5 840 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 TDRD10Q5VZ19 366 aaKnown RBP11.19□□□□□ -0.62
MCF2L-216ENST00000439475 SCARA3Q6AZY7 606 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 FAM171BQ6P995 826 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 PARM1Q6UWI2 310 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 VSTM1Q6UX27 236 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 HFE2Q6ZVN8 426 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 OSTM1Q86WC4 334 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 SMYD4Q8IYR2 804 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-216ENST00000439475 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 ELSPBP1Q96BH3 223 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 ASIC4Q96FT7 647 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 SHDQ96IW2 340 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 TNIP3Q96KP6 325 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 DNAJC25Q9H1X3 360 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 ATXN3LQ9H3M9 355 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-216ENST00000439475 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 NOTCH4Q99466 2003 aa11.19□□□□□ -0.62
MCF2L-216ENST00000439475 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 MYBPHLA2RUH7 354 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 DPYSL4O14531 572 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 SOAT2O75908 522 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 CFHP08603 1231 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 CEBPBP17676 345 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 LMO2P25791 158 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ANXA13P27216 316 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 PIK3CAP42336 1068 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 CYP27A1Q02318 531 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TEAD2Q15562 447 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ZCWPW2Q504Y3 356 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 KRT39Q6A163 491 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ISM2Q6H9L7 571 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 DEPDC1BQ8WUY9 529 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 KBTBD7Q8WVZ9 684 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ERCC4Q92889 916 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 FGF14Q92915 247 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 SMARCD2Q92925 531 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TCEAL4Q96EI5 215 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 LPIN3Q9BQK8 851 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 MRPL45Q9BRJ2 306 aaKnown RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 METTL14Q9HCE5 456 aaKnown RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TMEM8AQ9HCN3 771 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 SLC2A4RGQ9NR83 387 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TMLHEQ9NVH6 421 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-216ENST00000439475 TECTAO75443 2155 aa11.18□□□□□ -0.62
MCF2L-216ENST00000439475 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TSC2P49815 1807 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 SOBPA7XYQ1 873 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TRIM66O15016 1216 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 FGFR1OPO95684 399 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 HLA-DRAP01903 254 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 GJA1P17302 382 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 PTPN1P18031 435 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 ATF6P18850 670 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 CYP2F1P24903 491 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 DDX6P26196 483 aaKnown RBP eCLIP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 AVPR2P30518 371 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 GRIK1P39086 918 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 CCR2P41597 374 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 MAGEA11P43364 429 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 GCLMP48507 274 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 CLCN5P51795 746 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 NUBP1P53384 320 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 GPC5P78333 572 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 GPR158Q5T848 1215 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TCERG1LQ5VWI1 586 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TANGO2Q6ICL3 276 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TMC8Q8IU68 726 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TTC9BQ8N6N2 239 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 FLCNQ8NFG4 579 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 MRPS31Q92665 395 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 MYLPFQ96A32 169 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 FAXDC2Q96IV6 333 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms