RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SPATA18Q8TC71 538 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 BPIFB1Q8TDL5 484 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 LEO1Q8WVC0 666 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 HPDLQ96IR7 371 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 C7orf25Q9BPX7 421 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 IER2Q9BTL4 223 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 MKNK1Q9BUB5 465 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 LMAN1LQ9HAT1 526 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 TMLHEQ9NVH6 421 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 PCDHGA2Q9Y5H1 932 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 FANCMQ8IYD8 2048 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 UBE4BO95155 1302 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 SHISA7A6NL88 538 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 ARNTLO00327 626 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 CSH1P0DML2 217 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 CSH2P0DML3 217 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 MLLT6P55198 1093 aaPredicted RBP19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 PLCB2Q00722 1185 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 LRRC32Q14392 662 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 UNC13DQ70J99 1090 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 SPATA2LQ8IUW3 424 aaPredicted RBP19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 WDR49Q8IV35 697 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 NELFCDQ8IXH7 590 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 CELF5Q8N6W0 485 aaKnown RBP19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 RDH13Q8NBN7 331 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 ZNF507Q8TCN5 953 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 FNBP1Q96RU3 617 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 CHRDQ9H2X0 955 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 IL21Q9HBE4 155 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 ABCB6Q9NP58 842 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 AGPAT3Q9NRZ7 376 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 ZSCAN32Q9NX65 697 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 GTF3C4Q9UKN8 822 aa19.8■□□□□ 0.76
AC004540.1-201ENST00000439120 PRAMEF12O95522 483 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 DLATP10515 647 aaKnown RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 TNNI1P19237 187 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 DDX6P26196 483 aaKnown RBP eCLIP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 WEE1P30291 646 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 CYP2J2P51589 502 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 NLRP12P59046 1061 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 FZD5Q13467 585 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 SNRNP35Q16560 246 aaKnown RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 TSSK4Q6SA08 328 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 EPM2AIP1Q7L775 607 aaPredicted RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 DPH6Q7L8W6 267 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 CEP57L1Q8IYX8 460 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 CMTM8Q8IZV2 173 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 MAB21L3Q8N8X9 362 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 OR5B17Q8NGF7 314 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 TTC8Q8TAM2 541 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 CXorf38Q8TB03 319 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 RUBCNQ92622 972 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 MRPS31Q92665 395 aaKnown RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 ZFYVE19Q96K21 471 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 SLC46A2Q9BY10 475 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 BLZF1Q9H2G9 400 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 UXTQ9UBK9 157 aaPredicted RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 PTPRZ1P23471 2315 aaPredicted RBP19.79■□□□□ 0.76
AC004540.1-201ENST00000439120 PTPRJQ12913 1337 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SPECC1L-ADORA2AF8WAN1 911 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 CYP2F1P24903 491 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 HOXD13P35453 343 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 AFMP43652 599 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SOX9P48436 509 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 GPR15P49685 360 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 CCR3P51677 355 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 NRLP54845 237 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SNRPFP62306 86 aaKnown RBP19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 DDR2Q16832 855 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SOWAHAQ2M3V2 549 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SDHAF4Q5VUM1 108 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 RESP18Q5W5W9 173 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 C4orf50Q6ZRC1 276 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 RALGPS2Q86X27 583 aaPredicted RBP19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SCN4BQ8IWT1 228 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 ZNF687Q8N1G0 1237 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 MMS19Q96T76 1030 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 FAM126AQ9BYI3 521 aaPredicted RBP19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 SMG9Q9H0W8 520 aaKnown RBP19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 PRMT8Q9NR22 394 aaPredicted RBP19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 FAM186AA6NE01 2351 aa19.78■□□□□ 0.76
AC004540.1-201ENST00000439120 CLIC2O15247 247 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 HMGA1P17096 107 aaKnown RBP19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 CASP1P29466 404 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 SCARA3Q6AZY7 606 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 OSTM1Q86WC4 334 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 XXYLT1Q8NBI6 393 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 STKLD1Q8NE28 680 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 CCDC127Q96BQ5 260 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 FUBP3Q96I24 572 aaKnown RBP eCLIP19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 LRRC3BQ96PB8 259 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 SYT15Q9BQS2 421 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 KIF9Q9HAQ2 790 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 SLC39A2Q9NP94 309 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 GTSE1Q9NYZ3 720 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 NCDNQ9UBB6 729 aa19.77■□□□□ 0.76
AC004540.1-201ENST00000439120 ZNF638Q14966 1978 aaKnown RBP19.77■□□□□ 0.75
AC004540.1-201ENST00000439120 RIF1Q5UIP0 2472 aaKnown RBP19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms