RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TEX51A0A1B0GUA7 166 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 ARHGAP33O14559 1287 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 RECQL4O94761 1208 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 WISP1O95388 367 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 SYPP08247 313 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 ITPKAP23677 461 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 PLD1Q13393 1074 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 CTXN3Q4LDR2 81 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 HAUS3Q68CZ6 603 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 CD300LGQ6UXG3 332 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 KCNK18Q7Z418 384 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 RABEPKQ7Z6M1 372 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 DAW1Q8N136 415 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 FAM181AQ8N9Y4 354 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 UROC1Q96N76 676 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 FNBP1Q96RU3 617 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 CXCL16Q9H2A7 254 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 CAPN10Q9HC96 672 aa11.34□□□□□ -0.59
CPNE1-214ENST00000435747 KIAA1522Q9P206 1035 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-214ENST00000435747 NOL7Q9UMY1 257 aaKnown RBP11.34□□□□□ -0.59
CPNE1-214ENST00000435747 LRRK2Q5S007 2527 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 MYO18AQ92614 2054 aaKnown RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 OTOL1A6NHN0 477 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 PP2D1A8MPX8 630 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 LAD1O00515 517 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 SYN3O14994 580 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 ALDH1A2O94788 518 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 CPB1P15086 417 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 P2RY2P41231 377 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 NAMPTP43490 491 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 EPHB3P54753 998 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 ATP2C1P98194 919 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 MAPK7Q13164 816 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 UPP1Q16831 310 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 SPDYCQ5MJ68 293 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 HYIQ5T013 277 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 GPR155Q7Z3F1 870 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 GLRX5Q86SX6 157 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 MARCH9Q86YJ5 346 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 GALNT15Q8N3T1 639 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 CCDC26Q8TAB7 109 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 PDZD7Q9H5P4 517 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 LRWD1Q9UFC0 647 aa11.33□□□□□ -0.6
CPNE1-214ENST00000435747 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
CPNE1-214ENST00000435747 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 ACKR2O00590 384 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 FGF19O95750 216 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 GABRR2P28476 465 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 GJB2P29033 226 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 WEE1P30291 646 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 CDC25AP30304 524 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 CCT6AP40227 531 aaKnown RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 TAF1BQ53T94 588 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 GAREM2Q75VX8 874 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 TAS1R3Q7RTX0 852 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 EZH1Q92800 747 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 CD101Q93033 1021 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 ARID3AQ99856 593 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 SMG9Q9H0W8 520 aaKnown RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 TASP1Q9H6P5 420 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 GOLGA2P5Q9HBQ8 144 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 POLD4Q9HCU8 107 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 DDX19AQ9NUU7 478 aaKnown RBP11.32□□□□□ -0.6
CPNE1-214ENST00000435747 KIAA1024Q9UPX6 916 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
CPNE1-214ENST00000435747 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-214ENST00000435747 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 E9PMD0 336 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 ABLIM1O14639 778 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 ARSAP15289 507 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 GJA4P35212 333 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 CUL4AQ13619 759 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 BYSLQ13895 437 aaKnown RBP11.31□□□□□ -0.6
CPNE1-214ENST00000435747 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
CPNE1-214ENST00000435747 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 EEF1DP3Q658K8 133 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 FRMD1Q8N878 549 aa11.31□□□□□ -0.6
CPNE1-214ENST00000435747 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms