RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 ZNF560Q96MR9 790 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 AGO3Q9H9G7 860 aaKnown RBP16.02■□□□□ 0.16
SF1-209ENST00000433274 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 FAM105AQ9NUU6 356 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 KIAA1257Q9ULG3 409 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 NME7Q9Y5B8 376 aa16.02■□□□□ 0.16
SF1-209ENST00000433274 F8VP50 259 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 PTGESO14684 152 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 PSTPIP1O43586 416 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 HCRTO43612 131 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 PHF2O75151 1096 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 KRT3P12035 628 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 TCF4P15884 667 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 DR1Q01658 176 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 PDCLQ13371 301 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 ITGA7Q13683 1181 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 SMC1AQ14683 1233 aaKnown RBP16.02■□□□□ 0.15
SF1-209ENST00000433274 PPP2R5EQ16537 467 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 GOLGA7BQ2TAP0 167 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 PPP1R26Q5T8A7 1209 aaPredicted RBP16.02■□□□□ 0.15
SF1-209ENST00000433274 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 DDX42Q86XP3 938 aaKnown RBP eCLIP16.02■□□□□ 0.15
SF1-209ENST00000433274 XYLT1Q86Y38 959 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 CCDC50Q8IVM0 306 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.15
SF1-209ENST00000433274 TSPAN18Q96SJ8 248 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 TRIM51Q9BSJ1 452 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 CFHR5Q9BXR6 569 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 TRMT13Q9NUP7 481 aaKnown RBP16.02■□□□□ 0.15
SF1-209ENST00000433274 NOD1Q9Y239 953 aa16.02■□□□□ 0.15
SF1-209ENST00000433274 CEP350Q5VT06 3117 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 A8MXQ7 604 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 GPR182O15218 404 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 RARAP10276 462 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 GHRP10912 638 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 RFC1P35251 1148 aaPredicted RBP16.01■□□□□ 0.15
SF1-209ENST00000433274 TAF6P49848 677 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 APLP1P51693 650 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.15
SF1-209ENST00000433274 EMBQ6PCB8 327 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 JOSD2Q8TAC2 188 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 LPPQ93052 612 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 PIK3R2O00459 728 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 FAM153BP0C7A2 387 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
SF1-209ENST00000433274 CD52P31358 61 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 MLH1P40692 756 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 PNPLA4P41247 253 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 ACLYP53396 1101 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 FAM153CQ494X1 144 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 LPIN3Q9BQK8 851 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 CHST12Q9NRB3 414 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 METTL5Q9NRN9 209 aaKnown RBP16.01■□□□□ 0.15
SF1-209ENST00000433274 KLHL11Q9NVR0 708 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 FAM153AQ9UHL3 310 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 UTP11Q9Y3A2 253 aaKnown RBP16.01■□□□□ 0.15
SF1-209ENST00000433274 THSD7BQ9C0I4 1608 aa16.01■□□□□ 0.15
SF1-209ENST00000433274 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
SF1-209ENST00000433274 SIGLEC16A6NMB1 481 aa16■□□□□ 0.15
SF1-209ENST00000433274 FSCN2O14926 492 aa16■□□□□ 0.15
SF1-209ENST00000433274 CHRNA3P32297 505 aa16■□□□□ 0.15
SF1-209ENST00000433274 PIGHQ14442 188 aaPredicted RBP16■□□□□ 0.15
SF1-209ENST00000433274 SIX1Q15475 284 aaPredicted RBP16■□□□□ 0.15
SF1-209ENST00000433274 ATP13A4Q4VNC1 1196 aa16■□□□□ 0.15
SF1-209ENST00000433274 ZFYVE27Q5T4F4 411 aa16■□□□□ 0.15
SF1-209ENST00000433274 ZNF618Q5T7W0 954 aa16■□□□□ 0.15
SF1-209ENST00000433274 TTC27Q6P3X3 843 aa16■□□□□ 0.15
SF1-209ENST00000433274 KBTBD7Q8WVZ9 684 aa16■□□□□ 0.15
SF1-209ENST00000433274 PPP1R10Q96QC0 940 aaKnown RBP16■□□□□ 0.15
SF1-209ENST00000433274 GAD1Q99259 594 aa16■□□□□ 0.15
SF1-209ENST00000433274 TRIM31Q9BZY9 425 aa16■□□□□ 0.15
SF1-209ENST00000433274 WDR35Q9P2L0 1181 aa16■□□□□ 0.15
SF1-209ENST00000433274 PADI3Q9ULW8 664 aa16■□□□□ 0.15
SF1-209ENST00000433274 HPCAL4Q9UM19 191 aa16■□□□□ 0.15
SF1-209ENST00000433274 DAPK3O43293 454 aa16■□□□□ 0.15
SF1-209ENST00000433274 RPLP2P05387 115 aaKnown RBP16■□□□□ 0.15
SF1-209ENST00000433274 PFKMP08237 780 aa16■□□□□ 0.15
SF1-209ENST00000433274 FGFR1P11362 822 aa16■□□□□ 0.15
SF1-209ENST00000433274 PSMA2P25787 234 aa16■□□□□ 0.15
SF1-209ENST00000433274 AFF1P51825 1210 aaKnown RBP16■□□□□ 0.15
SF1-209ENST00000433274 ZNF268Q14587 947 aaPredicted RBP16■□□□□ 0.15
SF1-209ENST00000433274 STILQ15468 1287 aa16■□□□□ 0.15
SF1-209ENST00000433274 SV2CQ496J9 727 aa16■□□□□ 0.15
SF1-209ENST00000433274 CCDC137Q6PK04 289 aaKnown RBP16■□□□□ 0.15
SF1-209ENST00000433274 UNC93AQ86WB7 457 aa16■□□□□ 0.15
SF1-209ENST00000433274 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
SF1-209ENST00000433274 HACE1Q8IYU2 909 aa16■□□□□ 0.15
SF1-209ENST00000433274 EMC1Q8N766 993 aa16■□□□□ 0.15
SF1-209ENST00000433274 APPL2Q8NEU8 664 aa16■□□□□ 0.15
SF1-209ENST00000433274 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
SF1-209ENST00000433274 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
SF1-209ENST00000433274 HEMGNQ9BXL5 484 aa16■□□□□ 0.15
SF1-209ENST00000433274 DPH5Q9H2P9 285 aa16■□□□□ 0.15
SF1-209ENST00000433274 GDAP2Q9NXN4 497 aa16■□□□□ 0.15
SF1-209ENST00000433274 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms