RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PCDHB5Q9Y5E4 795 aa15.34■□□□□ 0.05
SMARCE1-205ENST00000431889 MYBPHLA2RUH7 354 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 HRO43593 1189 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 GAP43P17677 238 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 PDCP20941 246 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 CCR3P51677 355 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 NLRP12P59046 1061 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 PSMC1P62191 440 aaKnown RBP15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 POSTNQ15063 836 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 CCDC6Q16204 474 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 SCN4BQ8IWT1 228 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 RDH13Q8NBN7 331 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 OR5B17Q8NGF7 314 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 SPPL2BQ8TCT7 592 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 USP13Q92995 863 aaPredicted RBP15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 E2F7Q96AV8 911 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 HVCN1Q96D96 273 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 ZNF560Q96MR9 790 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 SIX4Q9UIU6 781 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.33■□□□□ 0.05
SMARCE1-205ENST00000431889 EXTL3O43909 919 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 F11P03951 625 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 SCP2P22307 547 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CDC25CP30307 473 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 TSPY1Q01534 308 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 ARHGAP29Q52LW3 1261 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CCDC73Q6ZRK6 1079 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CMTM8Q8IZV2 173 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CXorf38Q8TB03 319 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 DHX58Q96C10 678 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CHFRQ96EP1 664 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 SLC22A12Q96S37 553 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 FBRSL1Q9HCM7 1045 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 HPS4Q9NQG7 708 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 SEL1LQ9UBV2 794 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 CEP250Q9BV73 2442 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 RALGAPA1Q6GYQ0 2036 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 DCDC2BA2VCK2 349 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 K7ESF4 209 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 HUS1O60921 280 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 TADA3O75528 432 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 TGM1P22735 817 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 LMO2P25791 158 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 HOXD13P35453 343 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 AVPR1AP37288 418 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 SLC39A14Q15043 492 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 STK38Q15208 465 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 ELMO3Q96BJ8 720 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 C8orf33Q9H7E9 229 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 LAMA1P25391 3075 aa15.32■□□□□ 0.04
SMARCE1-205ENST00000431889 ANTXRLA6NF34 631 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 CLIC2O15247 247 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 STX6O43752 255 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 PDGFRBP09619 1106 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 ABCD1P33897 745 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 ATXN1P54253 815 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 FOXK2Q01167 660 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 SIM2Q14190 667 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 LRRC32Q14392 662 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 PUM1Q14671 1186 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 ITPRIPL2Q3MIP1 535 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 INTS6LQ5JSJ4 861 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 RALGPS2Q86X27 583 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 CELF5Q8N6W0 485 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 GMEB2Q9UKD1 530 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 RAB23Q9ULC3 237 aa15.31■□□□□ 0.04
SMARCE1-205ENST00000431889 ANAPC1Q9H1A4 1944 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 FGF19O95750 216 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 EGFP01133 1207 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 GARTP22102 1010 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 NRLP54845 237 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 CCINQ13939 588 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 PPP2R5DQ14738 602 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 SOWAHAQ2M3V2 549 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 GPD1LQ8N335 351 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 CACTINQ8WUQ7 758 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 PKMYT1Q99640 499 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 BLZF1Q9H2G9 400 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 THG1LQ9NWX6 298 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 DLL3Q9NYJ7 618 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 HSFX1Q9UBD0 423 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 WNT6Q9Y6F9 365 aa15.3■□□□□ 0.04
SMARCE1-205ENST00000431889 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
SMARCE1-205ENST00000431889 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms