RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 MAP3K7CLP57077 242 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 SF3A3Q12874 501 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■□ 22.7
SMPD4-205ENST00000431183 CLEC16AQ2KHT3 1053 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 MCOLN2Q8IZK6 566 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 SMG8Q8ND04 991 aaKnown RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 EXOC4Q96A65 974 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 RNPC3Q96LT9 517 aaKnown RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 RABEP2Q9H5N1 569 aa11.94□□□□□ -0.5
SMPD4-205ENST00000431183 MAGED2Q9UNF1 606 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-205ENST00000431183 LCTP09848 1927 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 GPR182O15218 404 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 MICAL2O94851 1124 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 KRT3P12035 628 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ABCD1P33897 745 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 RFC1P35251 1148 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 SEL1L2Q5TEA6 688 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ADGRF2Q8IZF7 708 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 MAGOHBQ96A72 148 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 COQ4Q9Y3A0 265 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 SOAT2O75908 522 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 HEXIM1O94992 359 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TMEM253P0C7T8 217 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 CCL5P13501 91 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ACO1P21399 889 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 GRM5P41594 1212 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TAF6P49848 677 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TLE2Q04725 743 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 CKAP4Q07065 602 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 LPIN1Q14693 890 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 DCAF4L1Q3SXM0 396 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 C9orf57Q5W0N0 161 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 SND1Q7KZF4 910 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 UBL4BQ8N7F7 174 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 RNF34Q969K3 372 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 C18orf8Q96DM3 657 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 RSAD1Q9HA92 442 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 DDX43Q9NXZ2 648 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 CAPN9O14815 690 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 PIGRP01833 764 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 CHRM1P11229 460 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 CKBP12277 381 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 RAD23BP54727 409 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ARHGEF6Q15052 776 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 WHAMMP3Q1A5X7 153 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 PTPN20Q4JDL3 420 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 TXNRD3NBQ6F5E7 133 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ZNF280BQ86YH2 543 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 EDEM1Q92611 657 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 PAWRQ96IZ0 340 aaKnown RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 KCNK16Q96T55 309 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 MYCBPQ99417 103 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ASB7Q9H672 318 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 ABI2Q9NYB9 513 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMPD4-205ENST00000431183 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 L1RE1Q9UN81 338 aa11.93□□□□□ -0.5
SMPD4-205ENST00000431183 KRT1P04264 644 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PYGMP11217 842 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 SYN1P17600 705 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 GLB1LQ6UWU2 654 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 CREG2Q8IUH2 290 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 SENP8Q96LD8 212 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 FUT8Q9BYC5 575 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
SMPD4-205ENST00000431183 TTLL3Q9Y4R7 772 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PLXNB2O15031 1838 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PPP1R7Q15435 360 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 SNX27Q96L92 541 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 MAGEB5Q9BZ81 275 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PARP14Q460N5 1801 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-205ENST00000431183 TTI1O43156 1089 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 IVLP07476 585 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 FECHP22830 423 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 PROZP22891 400 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 MAP2K2P36507 400 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 NDUFV1P49821 464 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 NOMO3P69849 1222 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 SOWAHAQ2M3V2 549 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 AGMOQ6ZNB7 445 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 SLC4A11Q8NBS3 891 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 CFAP57Q96MR6 1250 aa11.92□□□□□ -0.5
SMPD4-205ENST00000431183 LRRC4Q9HBW1 653 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms